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ECOLI:TRUB
Contents |
| Species (Taxon ID) | Escherichia coli (strain K12). ([1]) | |
| Gene Name(s) | truB (synonyms: yhbA) | |
| Protein Name(s) | tRNA pseudouridine synthase B
Protein p35 tRNA pseudouridine 55 synthase Psi55 synthase tRNA pseudouridylate synthase tRNA-uridine isomerase | |
| External Links | ||
| EMBL | X13270 X13775 U18997 U00096 AP009048 S79856 | |
| PIR | S01916 | |
| RefSeq | AP_003711.1 NP_417635.1 | |
| PDB | 1K8W 1R3F 1ZL3 | |
| PDBsum | 1K8W 1R3F 1ZL3 | |
| ProteinModelPortal | P60340 | |
| SMR | P60340 | |
| STRING | P60340 | |
| EnsemblBacteria | EBESCT00000000040 EBESCT00000000041 EBESCT00000017815 | |
| GeneID | 947687 | |
| GenomeReviews | AP009048_GR U00096_GR | |
| KEGG | ecj:JW3135 eco:b3166 | |
| EchoBASE | EB1164 | |
| EcoGene | EG11177 | |
| eggNOG | COG0130 | |
| GeneTree | EBGT00050000009810 | |
| HOGENOM | HBG397258 | |
| OMA | LGCGAYV | |
| ProtClustDB | PRK05033 | |
| BioCyc | EcoCyc:EG11177-MONOMER MetaCyc:EG11177-MONOMER | |
| Genevestigator | P60340 | |
| GO | GO:0009982 GO:0003723 GO:0001522 GO:0008033 | |
| HAMAP | MF_01080 | |
| InterPro | IPR002501 IPR020103 IPR015947 IPR014780 IPR015240 | |
| Pfam | PF09157 PF01509 | |
| SUPFAM | SSF55120 SSF88697 | |
| TIGRFAMs | TIGR00431 | |
Annotations
| Qualifier | GO ID | GO term name | Reference(s) | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0001522 |
pseudouridine synthesis |
IEA: Inferred from Electronic Annotation |
P |
|||||
| GO:0001522 |
pseudouridine synthesis |
IEA: Inferred from Electronic Annotation |
P |
|||||
| GO:0001522 |
pseudouridine synthesis |
IEA: Inferred from Electronic Annotation |
P |
|||||
| GO:0003723 |
RNA binding |
IEA: Inferred from Electronic Annotation |
F |
|||||
| GO:0003723 |
RNA binding |
IEA: Inferred from Electronic Annotation |
F |
|||||
| GO:0003723 |
RNA binding |
IEA: Inferred from Electronic Annotation |
F |
|||||
| GO:0006396 |
RNA processing |
IEA: Inferred from Electronic Annotation |
P |
|||||
| GO:0008033 |
tRNA processing |
IEA: Inferred from Electronic Annotation |
P |
|||||
| GO:0009451 |
RNA modification |
IEA: Inferred from Electronic Annotation |
P |
|||||
| GO:0009451 |
RNA modification |
IEA: Inferred from Electronic Annotation |
P |
|||||
| GO:0009451 |
RNA modification |
IEA: Inferred from Electronic Annotation |
P |
|||||
| GO:0009982 |
pseudouridine synthase activity |
IEA: Inferred from Electronic Annotation |
F |
|||||
| GO:0009982 |
pseudouridine synthase activity |
IEA: Inferred from Electronic Annotation |
F |
|||||
| GO:0009982 |
pseudouridine synthase activity |
IEA: Inferred from Electronic Annotation |
F |
|||||
| GO:0016853 |
isomerase activity |
IEA: Inferred from Electronic Annotation |
F |
| ||||
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
