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ECOLI:SRMB
Contents |
| Species (Taxon ID) | Escherichia coli (strain K12). ([1]) | |
| Gene Name(s) | srmB (synonyms: rbaB) | |
| Protein Name(s) | ATP-dependent RNA helicase SrmB | |
| External Links | ||
| EMBL | X14152 D13169 D64044 U00096 AP009048 | |
| PIR | G65035 | |
| RefSeq | NP_417071.1 | |
| ProteinModelPortal | P21507 | |
| SMR | P21507 | |
| DIP | DIP-10920N | |
| IntAct | P21507 | |
| MINT | MINT-1225512 | |
| EnsemblBacteria | EBESCT00000003180 EBESCT00000015098 | |
| GeneID | 947055 | |
| GenomeReviews | AP009048_GR U00096_GR | |
| KEGG | ecj:JW2560 eco:b2576 | |
| EchoBASE | EB0968 | |
| EcoGene | EG10975 | |
| eggNOG | COG0513 | |
| GeneTree | EBGT00050000008320 | |
| HOGENOM | HBG737336 | |
| OMA | FPRRKPG | |
| ProtClustDB | PRK11192 | |
| BioCyc | EcoCyc:EG10975-MONOMER | |
| Genevestigator | P21507 | |
| GO | GO:0005524 GO:0004004 GO:0003723 GO:0000027 | |
| InterPro | IPR014001 IPR011545 IPR001650 IPR000629 IPR014014 | |
| Pfam | PF00270 PF00271 | |
| SMART | SM00487 SM00490 | |
| PROSITE | PS00039 PS51192 PS51194 PS51195 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000027 |
ribosomal large subunit assembly |
IGI: Inferred from Genetic Interaction |
|
P |
Seeded From UniProt |
|||
| GO:0000166 |
nucleotide binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0003676 |
nucleic acid binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0003676 |
nucleic acid binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0003676 |
nucleic acid binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0003723 |
RNA binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0004004 |
ATP-dependent RNA helicase activity |
IDA: Inferred from Direct Assay |
|
F |
Seeded From UniProt |
|||
| GO:0004386 |
helicase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0004386 |
helicase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0005524 |
ATP binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0005524 |
ATP binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0005524 |
ATP binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0005524 |
ATP binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0008026 |
ATP-dependent helicase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0008026 |
ATP-dependent helicase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0016787 |
hydrolase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0043488 |
regulation of mRNA stability |
IMP: Inferred from Mutant Phenotype |
P |
Fig. 4 |
complete | |||
| GO:0016887 |
ATPase activity |
IDA: Inferred from Direct Assay |
F |
Table 1 |
complete | |||
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Nishi K et al. (1988) An eIF-4A-like protein is a suppressor of an Escherichia coli mutant defective in 50S ribosomal subunit assembly. Nature 336: 496-8 PubMed GONUTS page
- ↑ 2.0 2.1 Bizebard T et al. (2004) Studies on three E. coli DEAD-box helicases point to an unwinding mechanism different from that of model DNA helicases. Biochemistry 43: 7857-66 PubMed GONUTS page
- ↑ Iost I & Dreyfus M (1994) mRNAs can be stabilized by DEAD-box proteins. Nature 372: 193-6 PubMed GONUTS page
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