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ECOLI:HNS
Contents |
| Species (Taxon ID) | Escherichia coli (strain K12). (taxon:83333) | |
| Gene Name(s) | hns ( synonyms: bglY, cur, drdX, hnsA, msyA, osmZ, pilG, topS ) | |
| Protein Name(s) |
| |
| External Links | ||
| UniProt Identifier | HNS_ECOLI | |
| UniProt Accessions | P0ACF8, P08936, | |
| EMBL | X07688, X59940, X57231, X67326, U00096, AP009048, | |
| PIR | S00903, | |
| RefSeq | AP_001863.1, NP_415753.1, | |
| PDB | 1HNR, 1HNS, 1LR1, 1NI8, | |
| Pfam | PF00816, | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
F |
|||||
| GO:0005622 |
intracellular |
IEA: Inferred from Electronic Annotation |
C |
|||||
| GO:0006355 |
regulation of transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
P |
|||||
| GO:0003681 |
bent DNA binding |
IDA: Inferred from Direct Assay |
|
F |
||||
| GO:0045449 |
regulation of transcription |
IEA: Inferred from Electronic Annotation |
P |
|||||
| GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
F |
|||||
| GO:0016020 |
membrane |
IDA: Inferred from Direct Assay |
|
C |
||||
| GO:0006350 |
transcription |
IEA: Inferred from Electronic Annotation |
P |
|||||
| GO:0016481 |
negative regulation of transcription |
IDA: Inferred from Direct Assay |
P |
See Fig 3. The preferential binding to the Py region shows that H-NS down-regulates transcription from Py |
complete | |||
| GO:0045943 |
positive regulation of transcription from RNA polymerase I promoter |
IDA: Inferred from Direct Assay |
P |
See Fig 5 |
complete | |||
| GO:0016072 |
negative regulation of rRNA processing |
IMP: Inferred from Mutant Phenotype |
P |
see Fig 1 and Fig 2 |
complete | |||
| GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
F |
|||||
| GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
F |
|||||
| GO:0005622 |
intracellular |
IEA: Inferred from Electronic Annotation |
C |
|||||
| GO:0006351 |
transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
P |
|||||
| GO:0006355 |
regulation of transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
P |
|||||
| GO:0006355 |
regulation of transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
P |
|||||
| GO:0016020 |
membrane |
IDA: Inferred from Direct Assay |
C |
| ||||
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Azam TA & Ishihama A (1999) Twelve species of the nucleoid-associated protein from Escherichia coli. Sequence recognition specificity and DNA binding affinity. J Biol Chem 274: 33105-13 PubMed GONUTS page
- ↑ 2.0 2.1 Lasserre JP et al. (2006) A complexomic study of Escherichia coli using two-dimensional blue native/SDS polyacrylamide gel electrophoresis. Electrophoresis 27: 3306-21 PubMed GONUTS page
- ↑ Will WR & Frost LS (2006) Characterization of the opposing roles of H-NS and TraJ in transcriptional regulation of the F-plasmid tra operon. J Bacteriol 188: 507-14 PubMed GONUTS page
- ↑ Schröder O & Wagner R (2000) The bacterial DNA-binding protein H-NS represses ribosomal RNA transcription by trapping RNA polymerase in the initiation complex. J Mol Biol 298: 737-48 PubMed GONUTS page
- ↑ Afflerbach H et al. (1998) Effects of the Escherichia coli DNA-binding protein H-NS on rRNA synthesis in vivo. Mol Microbiol 28: 641-53 PubMed GONUTS page
bdim |
npr |
r cont.t |
