E. coli Annotation Targets

E. coli Gene Name	Predicted GO term	Citations in EcoCyc	Link to EcoCyc
AccB	GO:0003989	PMID:14594796[1]	AccB
HyfH	GO:0050136	PMID:9387241[2]	HyfH
RnhA	GO:0004523	PMID:4566677[3], PMID:6296074[4]	RnhA
AroK	GO:0016740	PMID:1309529[5]	AroK
LdhA	GO:0016616	PMID:11535784[6]	LdhA
MngB	GO:0004559	PMID:14645248[7]	MngB
AceA	GO:0004451	PMID:3049537[8], PMID:3290857[9]	AceA
FumA	GO:0004333	PMID:3282546[10]	FumA
ZraR	GO:0017111	PMID:7699720[11], PMID:1482126[12], PMID:2157156[13], PMID:8098993[14]	ZraR
HyfD	GO:0008137	PMID:9387241[2]	HyfD
KptA	GO:0016740	PMID:9915792[15], PMID:11705403[16], PMID:14504659[17]	KptA
Pck	GO:0004612	PMID:15023367[18]	Pck
TrmH	GO:0008168	PMID:12427942[19]	TrmH
HyfR	GO:0017111	PMID:9387241[2]	HyfR
Bfr	GO:0016491	PMID:3060115[20], PMID:8944892[21], PMID:10903139[22], PMID:11330712[23], PMID:11878806[24]	Bfr
SufS	GO:0008483	PMID:11290749[25]	SufS
Ade	GO:0000034	PMID:16041126[26]	Ade
FumB	GO:0004333	PMID:2656658[27], PMID:3282546[10]	FumB
AroF	GO:0016765	PMID:2903857[28]	AroF
PrlC	GO:0004222	PMID:1325967[29]	PrlC
KefF	GO:0016491	PMID:9312097[30]	KefF
CusS	GO:0016740	PMID:15522865[31]	CusS
AgaV	GO:0016740	PMID:97086503[32]	AgaV
DinG	GO:0016818	PMID:1629168[33]	DinG
AcpS	GO:0016740	PMID:7559576[34]	AcpS
DapB	GO:0008839	PMID:6094578[35]	DapB
Ugd	GO:0016616	PMID:12775214[36]	Ugd
TruB	GO:0009982	PMID:10924141[37], PMID:12756333[38], PMID:16300397[39]	TruB
RpoZ	GO:0016740	PMID:2646273[40], PMID:3549461[41]	RpoZ
SucD	GO:0004775	PMID:3543212[42], PMID:3332988[43], PMID:2548486[44], PMID:12952533[45]	SucD
HyfF	GO:0008137	PMID:9387241[2]	HyfF
PldB	GO:0016787	PMID:1646933[46]	PldB
PaaK	GO:0016874	PMID:8472917[47]	PaaK
YgfM	GO:0016491	PMID:11574054[48]	YgfM
AroG	GO:0016765	PMID:2903857[28], PMID:26682[49]	AroG
RnpA	GO:0004526	PMID:1714569[50], PMID:7730292[51], PMID:9571638[52], PMID:2199767[53]	RnpA
Ggt	GO:0003840	PMID:11552267[54], PMID:2571648[55], PMID:8104180[56], PMID:7903400[57], PMID:11782200[58]	Ggt
FumC	GO:0004333	PMID:3282546[10]	FumC
AroB	GO:0003856	PMID:3009224[59]	AroB
GatY	GO:0004332	PMID:12071968[60]	GatY
FadE	GO:0003995	PMID:6271734[61]	FadE
LpxK	GO:0016740	PMID:1323052[62]	LpxK
DinB	GO:0016740	PMID:12606122[63]	DinB
PurD	GO:0004637	PMID:2687276[64]	PurD
PurL	GO:0004642	PMID:2531746[65]	PurL
FadI	GO:0016747	PMID:12270828[66]	FadI
DhaL	GO:0016740	PMID:11350937[67], PMID:12813127[68]	DhaL
SucC	GO:0004775	PMID:3543212[42], PMID:3332988[43], PMID:2548486[44], PMID:12952533[45]	SucC
PtrA	GO:0004222	PMID:7674955[69], PMID:7674956[70]	PtrA
AroH	GO:0016765	PMID:2903857[28]	AroH
MltD	GO:0016798	PMID:1663890[71], PMID:10843862[72]	MltD
XdhD	GO:0016491	PMID:10986234[73]	XdhD
XdhB	GO:0016491	PMID:11574054[48], PMID:20444178[74]	XdhB
MhpD	GO:0016829	PMID:9098055[75]	MhpD
GldA	GO:0016491	PMID:8132480[76]	GldA
MalP	GO:0004645	PMID:3155826[77], PMID:10232933[78], PMID:10677342[79]	MalP
YpdE	GO:0004177	PMID:15901689[80]	YpdE
AgaB	GO:0016740	PMID:97086503[32]	AgaB
SucA	GO:0004591	PMID:6376123[81]	SucA
AroL	GO:0016740	PMID:3001025[82], PMID:3001029[83], PMID:3026317[84], PMID:1309529[5]	AroL
SsnA	GO:0016810	PMID:10986234[73], PMID:10074077[85]	SsnA
PurK	GO:0004638	PMID:2464576[86], PMID:8117684[87], PMID:10569930[88], PMID:1534690[89], PMID:2644189[90]	PurK
Tas	GO:0016491	PMID:11574054[48]	Tas
PflA	GO:0016491	PMID:19711960[91]	PflA
MalS	GO:0016787	PMID:1544897[92]	MalS
Rnr	GO:0016787	PMID:9603904[93]	Rnr
HolC	GO:0016740	PMID:8246893[94], PMID:8389364[95]	HolC
Aes	GO:0016787	PMID:12878309[96]	Aes
Icd	GO:0004450	PMID:3112144[97], PMID:4152156[98], PMID:4145959[99], PMID:ApostolakasetalCurrMicrobiol74582	Icd
GlvC	GO:0016740	PMID:15755952[100]	GlvC
XdhA	GO:0016491	PMID:11574054[48], PMID:10986234[73], PMID:20444178[74]	XdhA
XdhC	GO:0016491	PMID:11574054[48], PMID:20444178[74]	XdhC
HyfI	GO:0008137	PMID:9387241[2]	HyfI
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References

See Help:References for how to manage references in GONUTS.

1. ↑ James ES & Cronan JE (2004) Expression of two Escherichia coli acetyl-CoA carboxylase subunits is autoregulated. J Biol Chem 279: 2520-7 PubMed GONUTS page
2. ↑ ^{2.0 2.1 2.2 2.3 2.4} Andrews SC et al. (1997) A 12-cistron Escherichia coli operon (hyf) encoding a putative proton-translocating formate hydrogenlyase system. Microbiology 143 ( Pt 11): 3633-47 PubMed GONUTS page
3. ↑ Weatherford SC et al. (1972) Separation of Escherichia coli ribonucleases on a DNA agarose column and the identification of an RNase H activity. Biochem Biophys Res Commun 49: 1307-15 PubMed GONUTS page
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5. ↑ ^{5.0 5.1} Løbner-Olesen A & Marinus MG (1992) Identification of the gene (aroK) encoding shikimic acid kinase I of Escherichia coli. J Bacteriol 174: 525-9 PubMed GONUTS page
6. ↑ Jiang GR et al. (2001) Regulation of the ldhA gene, encoding the fermentative lactate dehydrogenase of Escherichia coli. Microbiology 147: 2437-46 PubMed GONUTS page
7. ↑ Sampaio MM et al. (2004) Phosphotransferase-mediated transport of the osmolyte 2-O-alpha-mannosyl-D-glycerate in Escherichia coli occurs by the product of the mngA (hrsA) gene and is regulated by the mngR (farR) gene product acting as repressor. J Biol Chem 279: 5537-48 PubMed GONUTS page
8. ↑ Matsuoka M & McFadden BA (1988) Isolation, hyperexpression, and sequencing of the aceA gene encoding isocitrate lyase in Escherichia coli. J Bacteriol 170: 4528-36 PubMed GONUTS page
9. ↑ Rieul C et al. (1988) Nucleotide sequence of the aceA gene coding for isocitrate lyase in Escherichia coli. Nucleic Acids Res 16: 5689 PubMed GONUTS page
10. ↑ ^{10.0 10.1 10.2} Woods SA et al. (1988) Two biochemically distinct classes of fumarase in Escherichia coli. Biochim Biophys Acta 954: 14-26 PubMed GONUTS page
11. ↑ Pao GM & Saier MH Jr (1995) Response regulators of bacterial signal transduction systems: selective domain shuffling during evolution. J Mol Evol 40: 136-54 PubMed GONUTS page
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27. ↑ Bell PJ et al. (1989) Nucleotide sequence of the FNR-regulated fumarase gene (fumB) of Escherichia coli K-12. J Bacteriol 171: 3494-503 PubMed GONUTS page
28. ↑ ^{28.0 28.1 28.2} Ray JM et al. (1988) Mutational analysis of the catalytic and feedback sites of the tryptophan-sensitive 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase of Escherichia coli. J Bacteriol 170: 5500-6 PubMed GONUTS page
29. ↑ Conlin CA et al. (1992) Escherichia coli prlC encodes an endopeptidase and is homologous to the Salmonella typhimurium opdA gene. J Bacteriol 174: 5881-7 PubMed GONUTS page
30. ↑ Miller S et al. (1997) Mutations in the glutathione-gated KefC K+ efflux system of Escherichia coli that cause constitutive activation. J Biol Chem 272: 24942-7 PubMed GONUTS page
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32. ↑ ^{32.0 32.1} Error. Invalid PMID ID number
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40. ↑ Gentry DR & Burgess RR (1989) rpoZ, encoding the omega subunit of Escherichia coli RNA polymerase, is in the same operon as spoT. J Bacteriol 171: 1271-7 PubMed GONUTS page
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