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DROME:ODD
Contents |
| Species (Taxon ID) | Drosophila melanogaster (Fruit fly). (7227) | |
| Gene Name(s) | odd | |
| Protein Name(s) | Protein odd-skipped | |
| External Links | ||
| UniProt | P23803 | |
| EMBL | X57480 AE014134 BT015214 | |
| PIR | S11998 | |
| RefSeq | NP_722922.1 | |
| UniGene | Dm.290 | |
| ProteinModelPortal | P23803 | |
| SMR | P23803 | |
| IntAct | P23803 | |
| MINT | MINT-759527 | |
| STRING | P23803 | |
| EnsemblMetazoa | FBtr0077557 | |
| GeneID | 33583 | |
| KEGG | dme:Dmel_CG3851 | |
| NMPDR | fig|7227.3.peg.615 | |
| CTD | 33583 | |
| FlyBase | FBgn0002985 | |
| eggNOG | inNOG09888 | |
| GeneTree | EMGT00070000025683 | |
| InParanoid | P23803 | |
| OMA | FTIDEIM | |
| OrthoDB | EOG4547FC | |
| PhylomeDB | P23803 | |
| NextBio | 784311 | |
| ArrayExpress | P23803 | |
| Bgee | P23803 | |
| GermOnline | CG3851 | |
| GO | GO:0005634 GO:0003677 GO:0008270 GO:0016348 GO:0007443 GO:0000122 GO:0007366 GO:0045944 GO:0006351 | |
| InterPro | IPR007087 IPR015880 IPR013087 | |
| Gene3D | G3DSA:3.30.160.60 | |
| KO | K09215 | |
| Pfam | PF00096 | |
| SMART | SM00355 | |
| PROSITE | PS00028 PS50157 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000122 |
negative regulation of transcription from RNA polymerase II promoter |
IMP: Inferred from Mutant Phenotype |
|
P |
Seeded From UniProt |
|||
| GO:0000122 |
negative regulation of transcription from RNA polymerase II promoter |
IDA: Inferred from Direct Assay |
|
P |
Seeded From UniProt |
|||
| GO:0003676 |
nucleic acid binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0003677 |
DNA binding |
NAS: Non-traceable Author Statement |
|
F |
Seeded From UniProt |
|||
| GO:0005622 |
intracellular |
IEA: Inferred from Electronic Annotation |
C |
Seeded From UniProt |
||||
| GO:0005622 |
intracellular |
IEA: Inferred from Electronic Annotation |
C |
Seeded From UniProt |
||||
| GO:0005634 |
nucleus |
IEA: Inferred from Electronic Annotation |
C |
Seeded From UniProt |
||||
| GO:0005634 |
nucleus |
IEA: Inferred from Electronic Annotation |
SP_SL:SL-0191 |
C |
Seeded From UniProt |
|||
| GO:0005634 |
nucleus |
IC: Inferred by Curator |
GO:0003677 |
C |
Seeded From UniProt |
|||
| GO:0006351 |
transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0006355 |
regulation of transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0007275 |
multicellular organismal development |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0007275 |
multicellular organismal development |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0007350 |
blastoderm segmentation |
IMP: Inferred from Mutant Phenotype |
|
P |
Seeded From UniProt |
|||
| GO:0007366 |
periodic partitioning by pair rule gene |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0007366 |
periodic partitioning by pair rule gene |
IMP: Inferred from Mutant Phenotype |
|
P |
Seeded From UniProt |
|||
| GO:0007443 |
Malpighian tubule morphogenesis |
IMP: Inferred from Mutant Phenotype |
|
P |
Seeded From UniProt |
|||
| GO:0008270 |
zinc ion binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0008270 |
zinc ion binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0016348 |
imaginal disc-derived leg joint morphogenesis |
IMP: Inferred from Mutant Phenotype |
|
P |
Seeded From UniProt |
|||
| GO:0045892 |
negative regulation of transcription, DNA-dependent |
IDA: Inferred from Direct Assay |
|
P |
Seeded From UniProt |
|||
| GO:0045892 |
negative regulation of transcription, DNA-dependent |
IDA: Inferred from Direct Assay |
|
P |
Seeded From UniProt |
|||
| GO:0045893 |
positive regulation of transcription, DNA-dependent |
IDA: Inferred from Direct Assay |
|
P |
Seeded From UniProt |
|||
| GO:0045944 |
positive regulation of transcription from RNA polymerase II promoter |
IDA: Inferred from Direct Assay |
|
P |
Seeded From UniProt |
|||
| GO:0046872 |
metal ion binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0007389 |
pattern specification process |
IMP: Inferred from Mutant Phenotype |
P |
See Figure 5: "observed clear defects in pair-rule gene expression patterns in slp and prd mutants" |
complete | |||
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Mullen JR & DiNardo S (1995) Establishing parasegments in Drosophila embryos: roles of the odd-skipped and naked genes. Dev Biol 169: 295-308 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 Saulier-Le Dréan B et al. (1998) Dynamic changes in the functions of Odd-skipped during early Drosophila embryogenesis. Development 125: 4851-61 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 Coulter DE et al. (1990) Molecular analysis of odd-skipped, a zinc finger encoding segmentation gene with a novel pair-rule expression pattern. EMBO J 9: 3795-804 PubMed GONUTS page
- ↑ Tena JJ et al. (2007) Odd-skipped genes encode repressors that control kidney development. Dev Biol 301: 518-31 PubMed GONUTS page
- ↑ Hao I et al. (2003) The odd-skipped family of zinc finger genes promotes Drosophila leg segmentation. Dev Biol 263: 282-95 PubMed GONUTS page
- ↑ Bouchard M et al. (2000) Combinatorial activity of pair-rule proteins on the Drosophila gooseberry early enhancer. Dev Biol 222: 135-46 PubMed GONUTS page
- ↑ Schroeder MD et al. (2011) How to make stripes: deciphering the transition from non-periodic to periodic patterns in Drosophila segmentation. Development 138: 3067-78 PubMed GONUTS page
