GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

DEIRA:Q9RUU2

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 /LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422). (243230)
Gene Name(s) No Information Provided.
Protein Name(s) DNA helicase RecQ (ECO:0000313 with EMBL:AAF10859.1)
External Links
UniProt Q9RUU2
EMBL AE000513
PIR G75413
RefSeq NP_295013.1
PDB 2MA1
2RHF
PDBsum 2MA1
2RHF
ProteinModelPortal Q9RUU2
SMR Q9RUU2
STRING 243230.DR_1289
EnsemblBacteria AAF10859
GeneID 1799726
KEGG dra:DR_1289
PATRIC 21630168
HOGENOM HOG000044388
InParanoid Q9RUU2
KO K03654
OMA NIRYTIV
OrthoDB EOG6ZSPDC
BioCyc DRAD243230:GH46-1318-MONOMER
EvolutionaryTrace Q9RUU2
Proteomes UP000002524
GO GO:0005622
GO:0005524
GO:0043140
GO:0003676
GO:0006310
GO:0006281
GO:0006260
GO:0009432
Gene3D 1.10.10.10
1.10.150.80
3.40.50.300
InterPro IPR011545
IPR004589
IPR006293
IPR014001
IPR001650
IPR010997
IPR002121
IPR027417
IPR018982
IPR011991
Pfam PF00270
PF00271
PF00570
PF09382
SMART SM00487
SM00490
SM00341
SM00956
SUPFAM SSF47819
SSF52540
TIGRFAMs TIGR01389
TIGR00614
PROSITE PS51192
PS51194
PS50967

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0043590

bacterial nucleoid

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10833
PANTHER:PTN000345099
UniProtKB:O34748

C

Seeded From UniProt

complete

enables

GO:0043140

ATP-dependent 3'-5' DNA helicase activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0002906
FB:FBgn0040290
MGI:MGI:1328362
PANTHER:PTN000344873
PomBase:SPAC2G11.12
UniProtKB:O94761
WB:WBGene00006944

F

Seeded From UniProt

complete

involved_in

GO:0032508

DNA duplex unwinding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0002906
FB:FBgn0040290
PANTHER:PTN000344873
PomBase:SPAC2G11.12
SGD:S000004802
TAIR:locus:2127998
TAIR:locus:2180255
TAIR:locus:2197555
UniProtKB:O94761
UniProtKB:P54132
UniProtKB:Q14191
UniProtKB:Q8I2W7
UniProtKB:Q9I920

P

Seeded From UniProt

complete

part_of

GO:0030894

replisome

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10833
PANTHER:PTN000345099

C

Seeded From UniProt

complete

part_of

GO:0017117

single-stranded DNA-dependent ATP-dependent DNA helicase complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10833
PANTHER:PTN000345099

C

Seeded From UniProt

complete

enables

GO:0017116

single-stranded DNA-dependent ATP-dependent DNA helicase activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10833
PANTHER:PTN001787175

F

Seeded From UniProt

complete

enables

GO:0009378

four-way junction helicase activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000344873
TAIR:locus:2127998
TAIR:locus:2197555
UniProtKB:P54132
UniProtKB:Q14191

F

Seeded From UniProt

complete

enables

GO:0008270

zinc ion binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10833
PANTHER:PTN001787175

F

Seeded From UniProt

complete

involved_in

GO:0006310

DNA recombination

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10833
PANTHER:PTN000344873
TAIR:locus:2127998
TAIR:locus:2197394
TAIR:locus:2206031

P

Seeded From UniProt

complete

involved_in

GO:0006281

DNA repair

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10833
FB:FBgn0002906
MGI:MGI:1328362
PANTHER:PTN000344873
TAIR:locus:2180255
TAIR:locus:2197394
UniProtKB:O94762

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10833
FB:FBgn0040290
MGI:MGI:1328362
PANTHER:PTN000344873

C

Seeded From UniProt

complete

part_of

GO:0005694

chromosome

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000344873
WB:WBGene00006944

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10833
PANTHER:PTN000344873
UniProtKB:P54132
UniProtKB:Q14191
UniProtKB:Q9I920

F

Seeded From UniProt

complete

enables

GO:0000166

nucleotide binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR010997

F

Seeded From UniProt

complete

enables

GO:0003676

nucleic acid binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002121
InterPro:IPR011545

F

Seeded From UniProt

complete

enables

GO:0003824

catalytic activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR010997

F

Seeded From UniProt

complete

enables

GO:0004003

ATP-dependent DNA helicase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006293

F

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011545

F

Seeded From UniProt

complete

involved_in

GO:0006260

DNA replication

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR018982

P

Seeded From UniProt

complete

involved_in

GO:0006281

DNA repair

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR018982

P

Seeded From UniProt

complete

involved_in

GO:0006310

DNA recombination

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR004589
InterPro:IPR006293

P

Seeded From UniProt

complete

enables

GO:0008026

ATP-dependent helicase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR004589

F

Seeded From UniProt

complete

involved_in

GO:0009432

SOS response

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006293

P

Seeded From UniProt

complete

enables

GO:0043140

ATP-dependent 3'-5' DNA helicase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR018982

F

Seeded From UniProt

complete

involved_in

GO:0044237

cellular metabolic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR010997

P

Seeded From UniProt

complete

enables

GO:0000166

nucleotide binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0547

F

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

enables

GO:0004386

helicase activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0347

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 1.12 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page