Category:PTHR11361:AN26

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Summary Table

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Aspect	ID	Term	HUMAN MSH2	SCHPO MSH6	WB msh‑5	WB him‑14	WB msh‑2	WB msh‑4	WB msh‑6	ZFIN msh6	ZFIN msh2	dictyBase msh6	dictyBase msh2	dictyBase msh1	dictyBase msh3	dictyBase msh4	dictyBase msh5	FB spel1	FB Msh6	MGI Msh2	MGI Msh3	MGI Msh5	MGI Msh6	SGD MSH3	SGD MSH1	HUMAN MSH5	RAT MSH5	HUMAN MSH4	HUMAN MSH6	RAT MSH2	SCHPO MSH2	SCHPO MSH1	HUMAN MSH3	SCHPO MSH3	SGD MSH4	SGD MSH5	SGD MSH6	SGD MSH2	MGI Msh4
Biological Process	GO:0000002	mitochondrial genome maintenance																							IMP
Biological Process	GO:0000003	reproduction				IMP	IMP	IMP
Biological Process	GO:0000710	meiotic mismatch repair		ISS															IMP					IMP					ISS								IMP	IMP
Biological Process	GO:0000735	removal of nonhomologous ends													ISS									IGI IMP TAS														IGI IMP
Biological Process	GO:0001541	ovarian follicle development																																					IMP
Biological Process	GO:0001701	in utero embryonic development																		IGI NOT IGI
Biological Process	GO:0002204	somatic recombination of immunoglobulin genes involved in immune response																		IGI
Biological Process	GO:0003006	reproductive developmental process	ISS-An																							ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An
Biological Process	GO:0006119	oxidative phosphorylation																		IMP
Biological Process	GO:0006200	ATP catabolic process																		IMP ISO			ISO
Biological Process	GO:0006281	DNA repair	IDA										ISS						ISS	IMP ISO	ISO		ISO		IMP				IDA				IDA
Biological Process	GO:0006298	mismatch repair	IDA	IMP			IMP		IMP		ISS	ISS	ISS	ISS	ISS		ISS	IMP ISS NAS		IDA IGI IMP ISO	IGI IMP ISO		IGI IMP ISO	IMP	IMP	ISS-An TAS	ISS-An	ISS-An	IDA IMP ISS-An	ISS-An	IGI IMP	ISS-An	IMP	ISS-An NOT TAS			IDA IMP	IMP
Biological Process	GO:0006301	postreplication repair	IDA										ISS					NAS	NAS	IMP ISO										ISS ISS-An
Biological Process	GO:0006302	double-strand break repair																		IMP
Biological Process	GO:0006310	DNA recombination													ISS									IMP									ISS-An	ISS-An				IMP
Biological Process	GO:0006311	meiotic gene conversion																																				IMP
Biological Process	GO:0006312	mitotic recombination													ISS									IMP														IMP
Biological Process	GO:0006915	apoptotic process																		IGI IMP
Biological Process	GO:0006974	response to DNA damage stimulus					IMP		IMP											IMP
Biological Process	GO:0007005	mitochondrion organization																							IMP
Biological Process	GO:0007050	cell cycle arrest																		IMP
Biological Process	GO:0007126	meiosis	ISS-An																							ISS-An TAS	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An					IDA IMP
Biological Process	GO:0007127	meiosis I																				IMP
Biological Process	GO:0007129	synapsis																				IMP				ISS-An	ISS-An	ISS-An											IMP
Biological Process	GO:0007131	reciprocal meiotic recombination		ISS	IMP	IMP										ISS	ISS								NOT IMP	ISS-An TAS	ISS-An	TAS						IMP	IMP	IMP
Biological Process	GO:0007136	meiotic prophase II																								TAS
Biological Process	GO:0007281	germ cell development																		IMP
Biological Process	GO:0007283	spermatogenesis																												IEP									IMP
Biological Process	GO:0007292	female gamete generation																				IMP																	IMP
Biological Process	GO:0007534	gene conversion at mating-type locus																													IMP			IMP
Biological Process	GO:0008340	determination of adult lifespan																		IMP			IMP						ISS
Biological Process	GO:0008584	male gonad development	ISS																	IMP
Biological Process	GO:0008629	induction of apoptosis by intracellular signals																					IMP						ISS
Biological Process	GO:0008630	DNA damage response, signal transduction resulting in induction of apoptosis																					IMP						ISS
Biological Process	GO:0009411	response to UV		ISS																			IMP						ISS
Biological Process	GO:0009792	embryo development ending in birth or egg hatching			IMP	IMP		IMP
Biological Process	GO:0010165	response to X-ray	ISS																	IMP
Biological Process	GO:0010224	response to UV-B	ISS																	IMP
Biological Process	GO:0014070	response to organic cyclic substance																												IEP
Biological Process	GO:0016446	somatic hypermutation of immunoglobulin genes																		IGI IMP NOT IMP	NOT IMP		IMP						ISS
Biological Process	GO:0016447	somatic recombination of immunoglobulin gene segments	ISS																	IGI IMP	IMP		IMP						ISS
Biological Process	GO:0019724	B cell mediated immunity	ISS																	IMP
Biological Process	GO:0030183	B cell differentiation	ISS																	IMP
Biological Process	GO:0030466	chromatin silencing at silent mating-type cassette																																				IGI
Biological Process	GO:0031573	intra-S DNA damage checkpoint																		IGI
Biological Process	GO:0032502	developmental process																										ISS-An
Biological Process	GO:0042493	response to drug																												IEP
Biological Process	GO:0042771	DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis					IMP
Biological Process	GO:0043066	negative regulation of apoptotic process																		IMP
Biological Process	GO:0043200	response to amino acid stimulus																												IEP
Biological Process	GO:0043504	mitochondrial DNA repair																							IMP
Biological Process	GO:0043524	negative regulation of neuron apoptosis	ISS																	IMP
Biological Process	GO:0043570	maintenance of DNA repeat elements	IMP	IMP			IMP		IMP	IMP	IMP							IMP		ISO	ISO								NOT IMP	ISS-An	IMP		IMP	IMP
Biological Process	GO:0045143	homologous chromosome segregation			IMP	IMP
Biological Process	GO:0045190	isotype switching	ISS																	IMP			IMP						ISS
Biological Process	GO:0045910	negative regulation of DNA recombination	IDA ISS	ISS																IMP ISO	ISO		IMP ISO						IDA				IDA
Biological Process	GO:0051026	chiasma assembly			IMP	IMP
Biological Process	GO:0051096	positive regulation of helicase activity	IDA																	ISO	ISO		ISO						IDA				IDA
Biological Process	GO:0051276	chromosome organization																													IMP
Biological Process	GO:0051729	germline cell cycle switching, mitotic to meiotic cell cycle				IMP
Cellular Component	GO:0000228	nuclear chromosome		ISS												ISS																			IDA			IDA
Cellular Component	GO:0000790	nuclear chromatin																					IDA
Cellular Component	GO:0000793	condensed chromosome																																					IDA
Cellular Component	GO:0000794	condensed nuclear chromosome	ISS-An																							ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An					IDA
Cellular Component	GO:0000795	synaptonemal complex																				IDA																	IDA ISS
Cellular Component	GO:0005634	nucleus	ISS-An	IDA								ISS				ISS	ISS			IC IDA ISO	ISO			IDA		ISS-An	ISS-An	ISS-An TAS	ISS-An	IMP	IDA	ISS-An	ISS-An	IDA		IDA	IDA	IDA	IDA
Cellular Component	GO:0005737	cytoplasm																						IDA
Cellular Component	GO:0005739	mitochondrion												ISS											IDA							IDA
Cellular Component	GO:0005829	cytosol		IDA																											IDA
Cellular Component	GO:0032300	mismatch repair complex																												ISS-An	ISS-An
Cellular Component	GO:0032301	MutSalpha complex	IDA	ISS			ISS		ISS			ISS	ISS							IDA ISO			IDA ISO						IDA								IPI	IPI
Cellular Component	GO:0032302	MutSbeta complex	IDA										ISS		ISS					ISO	ISO			IPI									IDA					IPI
Molecular Function	GO:0000400	four-way junction DNA binding	contributes_to IDA	ISS																									contributes_to IDA								IDA	IDA
Molecular Function	GO:0000403	Y-form DNA binding																						contributes_to IDA														contributes_to IDA
Molecular Function	GO:0000404	loop DNA binding																						contributes_to IDA														contributes_to IDA
Molecular Function	GO:0000406	double-strand/single-strand DNA junction binding																						IDA														IDA
Molecular Function	GO:0003674	molecular function																																		ND
Molecular Function	GO:0003677	DNA binding	IDA				ISS		ISS					ISS		ISS	ISS			IMP ISO	IGI		IGI IMP					TAS		ISS					IPI
Molecular Function	GO:0003682	chromatin binding																					IDA
Molecular Function	GO:0003684	damaged DNA binding	ISS-An	ISS																IMP	IGI		IGI IMP			ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An
Molecular Function	GO:0003690	double-stranded DNA binding	contributes_to IDA							IDA																			contributes_to IDA
Molecular Function	GO:0003697	single-stranded DNA binding	contributes_to IDA																														contributes_to IDA
Molecular Function	GO:0005515	protein binding	IPI contributes_to IPI																										IPI contributes_to IPI				IPI
Molecular Function	GO:0005524	ATP binding	contributes_to IDA	ISS		ISS						ISS	ISS	ISS			ISS												contributes_to IDA	ISS-An	ISS-An						IDA	IDA
Molecular Function	GO:0008022	protein C-terminus binding	IPI																	ISO
Molecular Function	GO:0008094	DNA-dependent ATPase activity		ISS																					IDA
Molecular Function	GO:0016887	ATPase activity	contributes_to IDA									ISS	ISS							IMP						ISS-An	ISS-An	ISS-An	contributes_to IDA	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An			IDA	IDA
Molecular Function	GO:0019237	centromeric DNA binding																		IDA	IDA
Molecular Function	GO:0019899	enzyme binding																		ISO	ISO
Molecular Function	GO:0019901	protein kinase binding																		ISO
Molecular Function	GO:0030983	mismatched DNA binding	ISS-An contributes_to IDA							IDA		contributes_to ISS	contributes_to ISS							IMP				contributes_to IDA		ISS-An	ISS-An	ISS-An	ISS-An contributes_to IDA	ISS-An	ISS-An	ISS-An	contributes_to IDA	ISS-An
Molecular Function	GO:0032134	mispaired DNA binding	contributes_to IDA																										contributes_to IDA
Molecular Function	GO:0032135	DNA insertion or deletion binding													ISS									IDA														contributes_to IDA
Molecular Function	GO:0032137	guanine/thymine mispair binding	IMP contributes_to IDA	ISS						IGI	IDA IGI									ISO contributes_to IDA			IDA contributes_to IDA		IDA				contributes_to IDA				NOT IDA				contributes_to IDA	contributes_to IDA
Molecular Function	GO:0032138	single base insertion or deletion binding		ISS																																	contributes_to IDA contributes_to IMP	contributes_to IDA contributes_to IMP
Molecular Function	GO:0032139	dinucleotide insertion or deletion binding	contributes_to IDA																						IDA								contributes_to IDA
Molecular Function	GO:0032142	single guanine insertion binding	contributes_to IDA																										contributes_to IDA				contributes_to IDA
Molecular Function	GO:0032143	single thymine insertion binding	contributes_to IDA																										contributes_to IDA
Molecular Function	GO:0032181	dinucleotide repeat insertion binding	contributes_to IDA																														contributes_to IDA
Molecular Function	GO:0032357	oxidized purine DNA binding	contributes_to IDA																										contributes_to IDA				Array IDA
Molecular Function	GO:0032405	MutLalpha complex binding	contributes_to IDA																										contributes_to IDA
Molecular Function	GO:0042802	identical protein binding	IPI
Molecular Function	GO:0042803	protein homodimerization activity	IDA										ISS							ISO									NOT IPI				NOT IDA
Molecular Function	GO:0043531	ADP binding	contributes_to IDA																										contributes_to IDA
Molecular Function	GO:0000287	magnesium ion binding	contributes_to IDA																										contributes_to IDA

Annotations inferred for PTHR11361:AN26

Qualifier	GO ID	GO term name	Reference(s)	Evidence Code	with/from	Aspect	Notes
	GO:0000794	condensed nuclear chromosome	PMID:17208035^[1]	ISS: Inferred from Sequence or Structural Similarity	TAIR=locus=2092404 MGI=MGI=1329021 TAIR=locus=2130913 MGI=MGI=1860077	C	Seeded From PANTHER
	GO:0003006	reproductive developmental process	PMID:17208035^[1]	ISS: Inferred from Sequence or Structural Similarity	SGD:S000005450 GeneDB_Spombe:SPBC19G7.01c MGI=MGI=101816 MGI=MGI=1860077 SGD:S000000688 GeneDB_Spombe:SPAC8F11.03	P	Seeded From PANTHER
	GO:0003684	damaged DNA binding	PMID:17208035^[1]	ISS: Inferred from Sequence or Structural Similarity	TAIR=locus=2132233 MGI=MGI=1343961 ENSEMBL=ENSG00000116062 TAIR=locus=2095097 ENSEMBL=ENSG00000095002 MGI=MGI=101816 TAIR=locus=2131829 MGI=MGI=109519 ENSEMBL=ENSG00000113318	F	Seeded From PANTHER
	GO:0005634	nucleus	PMID:17208035^[1]	ISS: Inferred from Sequence or Structural Similarity	TAIR=locus=2092404 SGD:S000002313 MGI=MGI=1329021 GeneDB_Spombe:SPCC285.16c SGD:S000002504 MGI=MGI=1343961 SGD:S000005450 GeneDB_Spombe:SPBC19G7.01c MGI=MGI=101816 RGD:620786 TAIR=locus=2130913 SGD=S000001891 MGI=MGI=1860077 SGD:S000000688 GeneDB_Spombe:SPAC8F11.03	C	Seeded From PANTHER
	GO:0007126	meiosis	PMID:17208035^[1]	ISS: Inferred from Sequence or Structural Similarity	TAIR=locus=2092404 SGD:S000002313 MGI=MGI=1329021 SGD:S000002504 FB=FBgn0036486 TAIR=locus=2095097 SGD:S000005450 TAIR=locus=2130913 SGD=S000001891 MGI=MGI=1860077 SGD=S000001162 SGD:S000000688 GeneDB_Spombe:SPAC8F11.03	P	Seeded From PANTHER
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↑ ^1.0 ^1.1 ^1.2 ^1.3 ^1.4 Thomas PD et al. (2007) Ontology annotation: mapping genomic regions to biological function. Curr Opin Chem Biol 11: 4-11 PubMed GONUTS page

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[PMID:17208035-0] 1.0 ^1.1 ^1.2 ^1.3 ^1.4 Thomas PD et al. (2007) Ontology annotation: mapping genomic regions to biological function. Curr Opin Chem Biol 11: 4-11 PubMed GONUTS page

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Category:PTHR11361:AN26

Contents

Graphs

Molecular Function graph

Biological Process graph

Cellular Component graph

Summary Table

Annotations inferred for PTHR11361:AN26

Notes

References

Pages in category "PTHR11361:AN26"

D

F

H

M

R

S

S cont.

W

Z

c

d

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