Category:PTHR11361:AN24

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Aspect	ID	Term	HUMAN MSH2	SCHPO MSH6	WB msh‑5	WB him‑14	WB msh‑2	WB msh‑4	WB msh‑6	ZFIN msh6	ZFIN msh2	dictyBase msh6	dictyBase msh2	dictyBase msh1	dictyBase msh3	dictyBase msh4	dictyBase msh5	FB spel1	FB Msh6	MGI Msh3	MGI Msh5	MGI Msh6	SGD MSH3	SGD MSH1	HUMAN MSH5	RAT MSH5	HUMAN MSH4	HUMAN MSH6	RAT MSH2	SCHPO MSH2	SCHPO MSH1	HUMAN MSH3	SCHPO MSH3	SGD MSH4	SGD MSH5	SGD MSH6	SGD MSH2	MGI Msh4
Biological Process	GO:0000002	mitochondrial genome maintenance																						IMP
Biological Process	GO:0000003	reproduction				IMP	IMP	IMP
Biological Process	GO:0000710	meiotic mismatch repair		ISS															IMP				IMP					ISS								IMP	IMP
Biological Process	GO:0000735	removal of nonhomologous ends													ISS								IGI IMP TAS														IGI IMP
Biological Process	GO:0001541	ovarian follicle development																																				IMP
Biological Process	GO:0003006	reproductive developmental process	ISS-An																						ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An
Biological Process	GO:0006200	ATP catabolic process																				ISO
Biological Process	GO:0006281	DNA repair	IDA										ISS						ISS	ISO		ISO		IMP				IDA				IDA
Biological Process	GO:0006298	mismatch repair	IDA	IMP			IMP		IMP		ISS	ISS	ISS	ISS	ISS		ISS	IMP ISS NAS		IGI IMP ISO		IGI IMP ISO	IMP	IMP	ISS-An TAS	ISS-An	ISS-An	IDA IMP ISS-An	ISS-An	IGI IMP	ISS-An	IMP	ISS-An NOT TAS			IDA IMP	IMP
Biological Process	GO:0006301	postreplication repair	IDA										ISS					NAS	NAS										ISS ISS-An
Biological Process	GO:0006310	DNA recombination													ISS								IMP									ISS-An	ISS-An				IMP
Biological Process	GO:0006311	meiotic gene conversion																																			IMP
Biological Process	GO:0006312	mitotic recombination													ISS								IMP														IMP
Biological Process	GO:0006974	response to DNA damage stimulus					IMP		IMP
Biological Process	GO:0007005	mitochondrion organization																						IMP
Biological Process	GO:0007126	meiosis	ISS-An																						ISS-An TAS	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An					IDA IMP
Biological Process	GO:0007127	meiosis I																			IMP
Biological Process	GO:0007129	synapsis																			IMP				ISS-An	ISS-An	ISS-An											IMP
Biological Process	GO:0007131	reciprocal meiotic recombination		ISS	IMP	IMP										ISS	ISS							NOT IMP	ISS-An TAS	ISS-An	TAS						IMP	IMP	IMP
Biological Process	GO:0007136	meiotic prophase II																							TAS
Biological Process	GO:0007283	spermatogenesis																											IEP									IMP
Biological Process	GO:0007292	female gamete generation																			IMP																	IMP
Biological Process	GO:0007534	gene conversion at mating-type locus																												IMP			IMP
Biological Process	GO:0008340	determination of adult lifespan																				IMP						ISS
Biological Process	GO:0008584	male gonad development	ISS
Biological Process	GO:0008629	induction of apoptosis by intracellular signals																				IMP						ISS
Biological Process	GO:0008630	DNA damage response, signal transduction resulting in induction of apoptosis																				IMP						ISS
Biological Process	GO:0009411	response to UV		ISS																		IMP						ISS
Biological Process	GO:0009792	embryo development ending in birth or egg hatching			IMP	IMP		IMP
Biological Process	GO:0010165	response to X-ray	ISS
Biological Process	GO:0010224	response to UV-B	ISS
Biological Process	GO:0014070	response to organic cyclic substance																											IEP
Biological Process	GO:0016446	somatic hypermutation of immunoglobulin genes																		NOT IMP		IMP						ISS
Biological Process	GO:0016447	somatic recombination of immunoglobulin gene segments	ISS																	IMP		IMP						ISS
Biological Process	GO:0019724	B cell mediated immunity	ISS
Biological Process	GO:0030183	B cell differentiation	ISS
Biological Process	GO:0030466	chromatin silencing at silent mating-type cassette																																			IGI
Biological Process	GO:0032502	developmental process																									ISS-An
Biological Process	GO:0042493	response to drug																											IEP
Biological Process	GO:0042771	DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis					IMP
Biological Process	GO:0043200	response to amino acid stimulus																											IEP
Biological Process	GO:0043504	mitochondrial DNA repair																						IMP
Biological Process	GO:0043524	negative regulation of neuron apoptosis	ISS
Biological Process	GO:0043570	maintenance of DNA repeat elements	IMP	IMP			IMP		IMP	IMP	IMP							IMP		ISO								NOT IMP	ISS-An	IMP		IMP	IMP
Biological Process	GO:0045143	homologous chromosome segregation			IMP	IMP
Biological Process	GO:0045190	isotype switching	ISS																			IMP						ISS
Biological Process	GO:0045910	negative regulation of DNA recombination	IDA ISS	ISS																ISO		IMP ISO						IDA				IDA
Biological Process	GO:0051026	chiasma assembly			IMP	IMP
Biological Process	GO:0051096	positive regulation of helicase activity	IDA																	ISO		ISO						IDA				IDA
Biological Process	GO:0051276	chromosome organization																												IMP
Biological Process	GO:0051729	germline cell cycle switching, mitotic to meiotic cell cycle				IMP
Cellular Component	GO:0000228	nuclear chromosome		ISS												ISS																		IDA			IDA
Cellular Component	GO:0000790	nuclear chromatin																				IDA
Cellular Component	GO:0000793	condensed chromosome																																				IDA
Cellular Component	GO:0000794	condensed nuclear chromosome	ISS-An																						ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An					IDA
Cellular Component	GO:0000795	synaptonemal complex																			IDA																	IDA ISS
Cellular Component	GO:0005634	nucleus	ISS-An	IDA								ISS				ISS	ISS			ISO			IDA		ISS-An	ISS-An	ISS-An TAS	ISS-An	IMP	IDA	ISS-An	ISS-An	IDA		IDA	IDA	IDA	IDA
Cellular Component	GO:0005737	cytoplasm																					IDA
Cellular Component	GO:0005739	mitochondrion												ISS										IDA							IDA
Cellular Component	GO:0005829	cytosol		IDA																										IDA
Cellular Component	GO:0032300	mismatch repair complex																											ISS-An	ISS-An
Cellular Component	GO:0032301	MutSalpha complex	IDA	ISS			ISS		ISS			ISS	ISS									IDA ISO						IDA								IPI	IPI
Cellular Component	GO:0032302	MutSbeta complex	IDA										ISS		ISS					ISO			IPI									IDA					IPI
Molecular Function	GO:0000400	four-way junction DNA binding	contributes_to IDA	ISS																								contributes_to IDA								IDA	IDA
Molecular Function	GO:0000403	Y-form DNA binding																					contributes_to IDA														contributes_to IDA
Molecular Function	GO:0000404	loop DNA binding																					contributes_to IDA														contributes_to IDA
Molecular Function	GO:0000406	double-strand/single-strand DNA junction binding																					IDA														IDA
Molecular Function	GO:0003674	molecular function																																	ND
Molecular Function	GO:0003677	DNA binding	IDA				ISS		ISS					ISS		ISS	ISS			IGI		IGI IMP					TAS		ISS					IPI
Molecular Function	GO:0003682	chromatin binding																				IDA
Molecular Function	GO:0003684	damaged DNA binding	ISS-An	ISS																IGI		IGI IMP			ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An
Molecular Function	GO:0003690	double-stranded DNA binding	contributes_to IDA							IDA																		contributes_to IDA
Molecular Function	GO:0003697	single-stranded DNA binding	contributes_to IDA																													contributes_to IDA
Molecular Function	GO:0005515	protein binding	IPI contributes_to IPI																									IPI contributes_to IPI				IPI
Molecular Function	GO:0005524	ATP binding	contributes_to IDA	ISS		ISS						ISS	ISS	ISS			ISS											contributes_to IDA	ISS-An	ISS-An						IDA	IDA
Molecular Function	GO:0008022	protein C-terminus binding	IPI
Molecular Function	GO:0008094	DNA-dependent ATPase activity		ISS																				IDA
Molecular Function	GO:0016887	ATPase activity	contributes_to IDA									ISS	ISS												ISS-An	ISS-An	ISS-An	contributes_to IDA	ISS-An	ISS-An	ISS-An	ISS-An	ISS-An			IDA	IDA
Molecular Function	GO:0019237	centromeric DNA binding																		IDA
Molecular Function	GO:0019899	enzyme binding																		ISO
Molecular Function	GO:0030983	mismatched DNA binding	ISS-An contributes_to IDA							IDA		contributes_to ISS	contributes_to ISS										contributes_to IDA		ISS-An	ISS-An	ISS-An	ISS-An contributes_to IDA	ISS-An	ISS-An	ISS-An	contributes_to IDA	ISS-An
Molecular Function	GO:0032134	mispaired DNA binding	contributes_to IDA																									contributes_to IDA
Molecular Function	GO:0032135	DNA insertion or deletion binding													ISS								IDA														contributes_to IDA
Molecular Function	GO:0032137	guanine/thymine mispair binding	IMP contributes_to IDA	ISS						IGI	IDA IGI											IDA contributes_to IDA		IDA				contributes_to IDA				NOT IDA				contributes_to IDA	contributes_to IDA
Molecular Function	GO:0032138	single base insertion or deletion binding		ISS																																contributes_to IDA contributes_to IMP	contributes_to IDA contributes_to IMP
Molecular Function	GO:0032139	dinucleotide insertion or deletion binding	contributes_to IDA																					IDA								contributes_to IDA
Molecular Function	GO:0032142	single guanine insertion binding	contributes_to IDA																									contributes_to IDA				contributes_to IDA
Molecular Function	GO:0032143	single thymine insertion binding	contributes_to IDA																									contributes_to IDA
Molecular Function	GO:0032181	dinucleotide repeat insertion binding	contributes_to IDA																													contributes_to IDA
Molecular Function	GO:0032357	oxidized purine DNA binding	contributes_to IDA																									contributes_to IDA				Array IDA
Molecular Function	GO:0032405	MutLalpha complex binding	contributes_to IDA																									contributes_to IDA
Molecular Function	GO:0042802	identical protein binding	IPI
Molecular Function	GO:0042803	protein homodimerization activity	IDA										ISS															NOT IPI				NOT IDA
Molecular Function	GO:0043531	ADP binding	contributes_to IDA																									contributes_to IDA
Molecular Function	GO:0000287	magnesium ion binding	contributes_to IDA																									contributes_to IDA

Annotations inferred for PTHR11361:AN24

Qualifier	GO ID	GO term name	Reference(s)	Evidence Code	with/from	Aspect	Notes
	GO:0006298	mismatch repair	PMID:17208035^[1]	ISS: Inferred from Sequence or Structural Similarity	ECOLI:EG10625-MONOMER GeneDB_Spombe:SPCC285.16c SGD:S000002504 FB=FBgn0036486 MGI=MGI=1343961 TAIR=locus=2095097 SGD:S000005450 GeneDB_Spombe:SPBC19G7.01c FB:FBgn0015546 MGI=MGI=101816 ENSEMBL:ENSG00000095002 SGD:S000001162 SGD:S000000688 MGI=MGI=109519 ENSEMBL:ENSG00000113318	P	Seeded From PANTHER
	GO:0016887	ATPase activity	PMID:17208035^[1]	ISS: Inferred from Sequence or Structural Similarity	ECOLI:EG10625-MONOMER SGD:S000002504 ENSEMBL:ENSG00000116062 SGD:S000005450 MGI=MGI=101816 ENSEMBL:ENSG00000095002 SGD=S000001162	F	Seeded From PANTHER
	GO:0030983	mismatched DNA binding	PMID:17208035^[1]	ISS: Inferred from Sequence or Structural Similarity	ECOLI:EG10625-MONOMER SGD=S000002504 ZFIN:ZDB-GENE-020905-3 MGI=MGI=1343961 ENSEMBL=ENSG00000116062 TAIR=locus=2095097 SGD=S000005450 ZFIN=ZDB-GENE-040426-2932 MGI=MGI=101816 ENSEMBL=ENSG00000095002 TAIR=locus=2131829 SGD=S000001162 SGD=S000000688 ENSEMBL:ENSG00000113318	F	Seeded From PANTHER
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References

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↑ ^1.0 ^1.1 ^1.2 Thomas PD et al. (2007) Ontology annotation: mapping genomic regions to biological function. Curr Opin Chem Biol 11: 4-11 PubMed GONUTS page

Pages in category "PTHR11361:AN24"

The following 36 pages are in this category, out of 36 total.

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[PMID:17208035-0] 1.0 ^1.1 ^1.2 Thomas PD et al. (2007) Ontology annotation: mapping genomic regions to biological function. Curr Opin Chem Biol 11: 4-11 PubMed GONUTS page

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Category:PTHR11361:AN24

Contents

Graphs

Molecular Function graph

Biological Process graph

Cellular Component graph

Summary Table

Annotations inferred for PTHR11361:AN24

Notes

References

Pages in category "PTHR11361:AN24"

D

F

H

H cont.

M

R

S

S cont.

W

Z

a

m

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