Category:GO:0006367 ! transcription initiation from RNA polymerase II promoter

name: transcription initiation from RNA polymerase II promoter
namespace: biological_process
def: "Any process involved in the assembly of the RNA polymerase II preinitiation complex (PIC) at an RNA polymerase II promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter. The initiation phase includes PIC assembly and the formation of the first few bonds in the RNA chain, including abortive initiation, which occurs when the first few nucleotides are repeatedly synthesized and then released. Promoter clearance, or release, is the transition between the initiation and elongation phases of transcription." [GOC:mah, GOC:txnOH]
comment: Note that promoter clearance is represented as a separate step, not part_of either initiation or elongation.
synonym: "transcription initiation from Pol II promoter" EXACT []
xref: Reactome:REACT_100392 "RNA Polymerase II Transcription Initiation, Dictyostelium discoideum"
xref: Reactome:REACT_101175 "RNA Polymerase II Transcription Initiation, Canis familiaris"
xref: Reactome:REACT_101341 "RNA Polymerase II Transcription Initiation, Danio rerio"
xref: Reactome:REACT_102266 "RNA Polymerase II Transcription Pre-Initiation And Promoter Opening, Canis familiaris"
xref: Reactome:REACT_103457 "RNA Polymerase II Transcription Initiation, Mus musculus"
xref: Reactome:REACT_104036 "RNA Polymerase II Transcription Initiation, Drosophila melanogaster"
xref: Reactome:REACT_104646 "RNA Polymerase II Transcription Initiation, Caenorhabditis elegans"
xref: Reactome:REACT_104707 "RNA Polymerase II Transcription Pre-Initiation And Promoter Opening, Danio rerio"
xref: Reactome:REACT_105389 "RNA Polymerase II Transcription Initiation, Oryza sativa"
xref: Reactome:REACT_1655 "RNA Polymerase II Transcription Pre-Initiation And Promoter Opening, Homo sapiens"
xref: Reactome:REACT_1851 "RNA Polymerase II Transcription Initiation, Homo sapiens"
xref: Reactome:REACT_28862 "RNA Polymerase II Transcription Pre-Initiation And Promoter Opening, Oryza sativa"
xref: Reactome:REACT_31702 "RNA Polymerase II Transcription Initiation, Gallus gallus"
xref: Reactome:REACT_32920 "RNA Polymerase II Transcription Pre-Initiation And Promoter Opening, Bos taurus"
xref: Reactome:REACT_6332 "HIV-1 Transcription Initiation, Homo sapiens"
xref: Reactome:REACT_77736 "RNA Polymerase II Transcription Initiation, Xenopus tropicalis"
xref: Reactome:REACT_79444 "RNA Polymerase II Transcription Pre-Initiation And Promoter Opening, Drosophila melanogaster"
xref: Reactome:REACT_79812 "RNA Polymerase II Transcription Initiation, Rattus norvegicus"
xref: Reactome:REACT_80956 "RNA Polymerase II Transcription Initiation, Schizosaccharomyces pombe"
xref: Reactome:REACT_81703 "RNA Polymerase II Transcription Pre-Initiation And Promoter Opening, Dictyostelium discoideum"
xref: Reactome:REACT_82794 "RNA Polymerase II Transcription Initiation, Bos taurus"
xref: Reactome:REACT_83749 "RNA Polymerase II Transcription Pre-Initiation And Promoter Opening, Saccharomyces cerevisiae"
xref: Reactome:REACT_84134 "RNA Polymerase II Transcription Pre-Initiation And Promoter Opening, Mus musculus"
xref: Reactome:REACT_85783 "RNA Polymerase II Transcription Pre-Initiation And Promoter Opening, Schizosaccharomyces pombe"
xref: Reactome:REACT_85917 "RNA Polymerase II Transcription Initiation, Taeniopygia guttata"
xref: Reactome:REACT_85990 "RNA Polymerase II Transcription Pre-Initiation And Promoter Opening, Xenopus tropicalis"
xref: Reactome:REACT_87429 "RNA Polymerase II Transcription Initiation, Saccharomyces cerevisiae"
xref: Reactome:REACT_87559 "RNA Polymerase II Transcription Pre-Initiation And Promoter Opening, Caenorhabditis elegans"
xref: Reactome:REACT_88340 "RNA Polymerase II Transcription Initiation, Arabidopsis thaliana"
xref: Reactome:REACT_88353 "RNA Polymerase II Transcription Pre-Initiation And Promoter Opening, Gallus gallus"
xref: Reactome:REACT_92769 "RNA Polymerase II Transcription Pre-Initiation And Promoter Opening, Rattus norvegicus"
xref: Reactome:REACT_95808 "RNA Polymerase II Transcription Pre-Initiation And Promoter Opening, Taeniopygia guttata"
xref: Reactome:REACT_98915 "RNA Polymerase II Transcription Pre-Initiation And Promoter Opening, Arabidopsis thaliana"
is_a: GO:0006352 ! transcription initiation, DNA-dependent
relationship:part_of: GO:0006366 ! transcription from RNA polymerase II promoter

AmiGO

Child Terms

This term has the following 7 child terms, out of 7 total.

• [+] GO:0001113 ! transcriptional open complex formation at RNA polymerase II promoter (1)
• [+] GO:0001174 ! transcriptional start site selection at RNA polymerase II promoter (1)
• [  ] GO:0016245 ! hyperphosphorylation of RNA polymerase II C-terminal domain
• [+] GO:0051123 ! RNA polymerase II transcriptional preinitiation complex assembly (3)
• [+] GO:0060260 ! regulation of transcription initiation from RNA polymerase II promoter (5)
• [  ] GO:0060261 ! positive regulation of transcription initiation from RNA polymerase II promoter
• [  ] GO:0060633 ! negative regulation of transcription initiation from RNA polymerase II promoter

Pages in category "GO:0006367 ! transcription initiation from RNA polymerase II promoter"

The following 200 pages are in this category, out of 226 total.