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CHICK:CTCF

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Contents

Species (Taxon ID) Gallus gallus (Chicken). (taxon:9031)
Gene Name(s) CTCF
Protein Name(s)
  • Transcriptional repressor CTCF
  • 11-zinc finger protein
  • CCCTC-binding factor
  • CTCFL paralog
External Links
UniProt Identifier CTCF_CHICK
UniProt Accessions Q08705,
EMBL Z22605,
PIR A54603,
RefSeq NP_990663.1,
IntAct Q08705,
Pfam PF00096,

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0003676

nucleic acid binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR013087

F

GO:0003677

DNA binding

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0238

F

GO:0005515

protein binding

PMID:10734189[1]

IPI: Inferred from Physical Interaction

UniProtKB:P49711

F

GO:0005515

protein binding

PMID:10734189[1]

IPI: Inferred from Physical Interaction

UniProtKB:Q60520

F

GO:0005515

protein binding

PMID:15229244[2]

IPI: Inferred from Physical Interaction

UniProtKB:P67809

F

GO:0005622

intracellular

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007087

C

GO:0005622

intracellular

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR015880

C

GO:0005634

nucleus

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0539

C

GO:0005634

nucleus

GO_REF:0000023

IEA: Inferred from Electronic Annotation

SP_SL:SL-0191

C

GO:0006351

transcription, DNA-dependent

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0804

P

GO:0006355

regulation of transcription, DNA-dependent

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0805

P

GO:0008270

zinc ion binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007087

F

GO:0008270

zinc ion binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR015880

F

GO:0046872

metal ion binding

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0479

F


Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Lutz M et al. (2000) Transcriptional repression by the insulator protein CTCF involves histone deacetylases. Nucleic Acids Res 28: 1707-13 PubMed GONUTS page
  2. Klenova E et al. (2004) YB-1 and CTCF differentially regulate the 5-HTT polymorphic intron 2 enhancer which predisposes to a variety of neurological disorders. J Neurosci 24: 5966-73 PubMed GONUTS page
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