GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

CAEEL:Q21801

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Caenorhabditis elegans. (6239)
Gene Name(s) No Information Provided.
Protein Name(s) Protein GANA-1 (ECO:0000313 with EMBL:CAB00120.1)
External Links
UniProt Q21801
EMBL Z75955
PIR T24018
RefSeq NP_506031.1
UniGene Cel.2869
ProteinModelPortal Q21801
SMR Q21801
STRING 6239.R07B7.11
CAZy GH27
PaxDb Q21801
PRIDE Q21801
EnsemblMetazoa R07B7.11
GeneID 179660
KEGG cel:CELE_R07B7.11
UCSC R07B7.11
CTD 179660
WormBase R07B7.11
eggNOG NOG68897
GeneTree ENSGT00390000008751
HOGENOM HOG000161224
InParanoid Q21801
OMA YGTKTCG
OrthoDB EOG7F24SV
PhylomeDB Q21801
Reactome REACT_197713
NextBio 906338
PRO PR:Q21801
Proteomes UP000001940
GO GO:0005737
GO:0004557
GO:0016139
GO:0046477
GO:0009311
Gene3D 2.60.40.1180
3.20.20.70
InterPro IPR013785
IPR013780
IPR002241
IPR000111
IPR017853
Pfam PF02065
PRINTS PR00740
SUPFAM SSF51445
PROSITE PS00512

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0016139

glycoside catabolic process

PMID:15676072[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

GO:0008456

alpha-N-acetylgalactosaminidase activity

PMID:15676072[1]

ECO:0000247

UniProtKB:P17050


F

Fig 2.

complete

part_of

GO:0005737

cytoplasm

PMID:15676072[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0046477

glycosylceramide catabolic process

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1347344
PANTHER:PTN000155295

P

Seeded From UniProt

complete

involved_in

GO:0016139

glycoside catabolic process

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000155295
WB:WBGene00011095

P

Seeded From UniProt

complete

involved_in

GO:0009311

oligosaccharide metabolic process

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000155295
UniProtKB:P06280

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000155295
UniProtKB:P06280
WB:WBGene00011095

C

Seeded From UniProt

complete

enables

GO:0004557

alpha-galactosidase activity

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1347344
PANTHER:PTN000155295
PomBase:SPAC869.07c
RGD:1589721
UniProtKB:P06280
UniProtKB:Q5AX28

F

Seeded From UniProt

complete

enables

GO:0003824

catalytic activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR013785

F

Seeded From UniProt

complete

enables

GO:0004553

hydrolase activity, hydrolyzing O-glycosyl compounds

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000111
InterPro:IPR002241

F

Seeded From UniProt

complete

involved_in

GO:0005975

carbohydrate metabolic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000111
InterPro:IPR002241

P

Seeded From UniProt

complete

enables

GO:0016798

hydrolase activity, acting on glycosyl bonds

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0326

F

Seeded From UniProt

complete

involved_in

GO:0008152

metabolic process

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0326

P

Seeded From UniProt

complete

enables

GO:0016787

hydrolase activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0378

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Hujová, J et al. (2005) Characterization of gana-1, a Caenorhabditis elegans gene encoding a single ortholog of vertebrate alpha-galactosidase and alpha-N-acetylgalactosaminidase. BMC Cell Biol. 6 5 PubMed GONUTS page
  2. 2.0 2.1 2.2 2.3 2.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page