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BPPRD:EXLYS

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Species (Taxon ID) Enterobacteria phage PRD1 (Bacteriophage PRD1). (10658)
Gene Name(s) VII
Protein Name(s) Transglycosylase

Protein P7

External Links
UniProt P27380
EMBL AY848689
AY848689
PIR B36777
RefSeq NP_040700.1
YP_001542614.1
ProteinModelPortal P27380
CAZy GH23
GeneID 1260931
5729506
KEGG vg:1260931
vg:5729506
Proteomes UP000002143
GO GO:0016021
GO:0019012
GO:0055036
GO:0016837
GO:0003796
GO:0008933
GO:0051672
GO:0019835
GO:0042742
GO:0046718
InterPro IPR023346
IPR000189
IPR008258
Pfam PF01464
SUPFAM SSF53955
PROSITE PS00922

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0003796

lysozyme activity

PMID:10931330[1]

ECO:0000314

F

Figure 4.

complete
CACAO 5495

GO:0055036

virion membrane

PMID:11741849[2]

ECO:0000314

C

Figure 3 "Zymogram analysis revealed the presence of proteins P7 and P15 in both DNA-filled and empty phage membranes"

complete
CACAO 5678

GO:0051672

catabolism by organism of cell wall peptidoglycan in other organism

PMID:11741849[2]

ECO:0000314

P

Figure 1a lane 2 (labeled "wt") shows that P7 "degraded the peptidoglycan substrate added to the gels and [was] detected as [a] clear zone."

complete
CACAO 5681

GO:0051672

catabolism by organism of cell wall peptidoglycan in other organism

PMID:10931330[1]

ECO:0000315

P

Figure 4

complete
CACAO 5764

GO:0019012

virion

PMID:11697904[3]

ECO:0000314

C

Figure 3.

complete
CACAO 6825

GO:0019012

virion

PMID:17202207[4]

ECO:0000314

C

Figure 1.

complete
CACAO 7766

involved_in

GO:0051672

catabolism by organism of cell wall peptidoglycan in other organism

PMID:10931330[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0055036

virion membrane

PMID:11741849[2]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0051672

catabolism by organism of cell wall peptidoglycan in other organism

PMID:11741849[2]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0019012

virion

PMID:17202207[4]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0019012

virion

PMID:11697904[3]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0003796

lysozyme activity

PMID:10931330[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0000270

peptidoglycan metabolic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000189

P

Seeded From UniProt

complete

enables

GO:0008933

lytic transglycosylase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000189

F

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000189

C

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

involved_in

GO:0008152

metabolic process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0081

P

Seeded From UniProt

complete

part_of

GO:0019012

virion

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0946

C

Seeded From UniProt

complete

enables

GO:0016829

lyase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0456

F

Seeded From UniProt

complete

part_of

GO:0039641

viral inner membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1231

C

Seeded From UniProt

complete

involved_in

GO:0046718

viral entry into host cell

GO_REF:0000037
GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1160
UniProtKB-KW:KW-1162

P

Seeded From UniProt

complete

involved_in

GO:0019835

cytolysis

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0081

P

Seeded From UniProt

complete

involved_in

GO:0098994

disruption of host cell envelope during viral entry

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1235

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

involved_in

GO:0098932

disruption by virus of host cell wall peptidoglycan during virus entry

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1236

P

Seeded From UniProt

complete

involved_in

GO:0042742

defense response to bacterium

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0081

P

Seeded From UniProt

complete

enables

GO:0003824

catalytic activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0081

F

Seeded From UniProt

complete

part_of

GO:0055036

virion membrane

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0275

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Rydman, PS & Bamford, DH (2000) Bacteriophage PRD1 DNA entry uses a viral membrane-associated transglycosylase activity. Mol. Microbiol. 37 356-63 PubMed GONUTS page
  2. 2.0 2.1 2.2 2.3 Rydman, PS & Bamford, DH (2002) The lytic enzyme of bacteriophage PRD1 is associated with the viral membrane. J. Bacteriol. 184 104-10 PubMed GONUTS page
  3. 3.0 3.1 Rydman, PS et al. (2001) A minor capsid protein P30 is essential for bacteriophage PRD1 capsid assembly. J. Mol. Biol. 313 785-95 PubMed GONUTS page
  4. 4.0 4.1 Karhu, NJ et al. (2007) Efficient DNA packaging of bacteriophage PRD1 requires the unique vertex protein P6. J. Virol. 81 2970-9 PubMed GONUTS page