GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

BOVIN:H31

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Bos taurus (Bovine). (9913)
Gene Name(s) No Information Provided.
Protein Name(s) Histone H3.1
External Links
UniProt P68432
PIR A02624
RefSeq XP_002697506.1
XP_002697575.1
XP_005196706.1
XP_005223855.1
XP_010816767.1
XP_010816811.1
XP_010816818.1
XP_010823711.1
XP_010823719.1
XP_010823755.1
XP_874006.1
ProteinModelPortal P68432
SMR P68432
BioGrid 544398
IntAct P68432
STRING 9913.ENSBTAP00000053020
PaxDb P68432
PRIDE P68432
Ensembl ENSBTAT00000033364
ENSBTAT00000033374
ENSBTAT00000033376
ENSBTAT00000044972
ENSBTAT00000044975
ENSBTAT00000045036
ENSBTAT00000045041
ENSBTAT00000045045
ENSBTAT00000045050
ENSBTAT00000047042
GeneID 104976714
517139
523214
525511
616800
616819
788250
KEGG bta:104976714
bta:517139
bta:523214
bta:525511
bta:616800
bta:616819
bta:788250
CTD 8351
8352
8353
8354
8355
eggNOG COG2036
GeneTree ENSGT00760000118967
HOGENOM HOG000155290
HOVERGEN HBG001172
InParanoid P68432
KO K11253
OMA LARRIRX
OrthoDB EOG7HB5C2
TreeFam TF314241
Reactome REACT_278664
REACT_283854
REACT_299696
REACT_301707
REACT_308874
REACT_311094
REACT_335907
REACT_338219
REACT_344113
REACT_345668
REACT_348678
REACT_351362
REACT_362231
NextBio 20872386
Proteomes UP000009136
GO GO:0070062
GO:0016020
GO:0000788
GO:0003677
GO:0006335
GO:0051290
GO:0060968
Gene3D 1.10.20.10
InterPro IPR009072
IPR007125
IPR000164
PANTHER PTHR11426
Pfam PF00125
PRINTS PR00622
SMART SM00428
SUPFAM SSF47113
PROSITE PS00322
PS00959

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

enables

GO:0031492

nucleosomal DNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000152096
UniProtKB:Q6NXT2

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000152096
TAIR:locus:2035252
TAIR:locus:2035415
UniProtKB:P49450
UniProtKB:P59169
UniProtKB:P68431
UniProtKB:Q71DI3
WB:WBGene00001831
WB:WBGene00001946
WB:WBGene00010036
dictyBase:DDB_G0271092

C

Seeded From UniProt

complete

part_of

GO:0000786

nucleosome

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0004828
PANTHER:PTN000152096
UniProtKB:P68431
UniProtKB:P84243
UniProtKB:Q16695
UniProtKB:Q6PI20
UniProtKB:Q71DI3
WB:WBGene00001946

C

Seeded From UniProt

complete

part_of

GO:0000786

nucleosome

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000164
InterPro:IPR007125

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000164
InterPro:IPR007125

F

Seeded From UniProt

complete

enables

GO:0046982

protein heterodimerization activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR009072

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

part_of

GO:0005694

chromosome

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0158
UniProtKB-SubCell:SL-0468

C

Seeded From UniProt

complete

part_of

GO:0000786

nucleosome

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0544

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page