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BACSU:RECQ
Contents
| Species (Taxon ID) | Bacillus subtilis (strain 168). (224308) | |
| Gene Name(s) | recQ (synonyms: yocI) | |
| Protein Name(s) | Probable ATP-dependent DNA helicase RecQ | |
| External Links | ||
| UniProt | O34748 | |
| EMBL | AF027868 AL009126 | |
| PIR | F69901 | |
| RefSeq | NP_389803.1 WP_004399229.1 | |
| ProteinModelPortal | O34748 | |
| SMR | O34748 | |
| STRING | 224308.Bsubs1_010100010606 | |
| PaxDb | O34748 | |
| EnsemblBacteria | CAB13814 | |
| GeneID | 939671 | |
| KEGG | bsu:BSU19220 | |
| PATRIC | 18975693 | |
| GenoList | BSU19220 | |
| eggNOG | COG0514 | |
| HOGENOM | HOG000044388 | |
| InParanoid | O34748 | |
| KO | K03654 | |
| OMA | KENTVYT | |
| OrthoDB | EOG6ZSPDC | |
| PhylomeDB | O34748 | |
| BioCyc | BSUB:BSU19220-MONOMER | |
| Proteomes | UP000001570 | |
| GO | GO:0043590 GO:0005737 GO:0005524 GO:0043140 GO:0003677 GO:0006310 GO:0006281 GO:0006260 GO:0009432 | |
| Gene3D | 1.10.10.10 1.10.150.80 3.40.50.300 | |
| InterPro | IPR011545 IPR004589 IPR006293 IPR014001 IPR001650 IPR010997 IPR002121 IPR027417 IPR018982 IPR011991 | |
| Pfam | PF00270 PF00271 PF00570 PF09382 | |
| SMART | SM00487 SM00490 SM00341 SM00956 | |
| SUPFAM | SSF47819 SSF52540 | |
| TIGRFAMs | TIGR01389 TIGR00614 | |
| PROSITE | PS51192 PS51194 PS50967 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:0043590 |
bacterial nucleoid |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0043590 |
bacterial nucleoid |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10833 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0043140 |
ATP-dependent 3'-5' DNA helicase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0002906 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0032508 |
DNA duplex unwinding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0002906 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0030894 |
replisome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10833 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0017117 |
single-stranded DNA-dependent ATP-dependent DNA helicase complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10833 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0009378 |
four-way junction helicase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000344873 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10833 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006281 |
DNA repair |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10833 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10833 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005694 |
chromosome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000344873 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10833 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0000166 |
nucleotide binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003676 |
nucleic acid binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003824 |
catalytic activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004003 |
ATP-dependent DNA helicase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006260 |
DNA replication |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006281 |
DNA repair |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008026 |
ATP-dependent helicase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009432 |
SOS response |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0043140 |
ATP-dependent 3'-5' DNA helicase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0044237 |
cellular metabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004386 |
helicase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009432 |
SOS response |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006281 |
DNA repair |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009295 |
nucleoid |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Sanchez, H et al. (2006) Recruitment of Bacillus subtilis RecN to DNA double-strand breaks in the absence of DNA end processing. J. Bacteriol. 188 353-60 PubMed GONUTS page
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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