GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

ARATH:TCP18

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Arabidopsis thaliana (Mouse-ear cress). (3702)
Gene Name(s) TCP18 (synonyms: BRC1, TBL1)
Protein Name(s) Transcription factor TCP18

Protein BRANCHED 1 Protein TEOSINTE BRANCHED 1-LIKE 1

External Links
UniProt A1YKT1
EMBL AM408560
EF062581
AP001303
CP002686
CP002686
RefSeq NP_001118656.1
NP_188485.2
UniGene At.50196
BioGrid 6719
STRING 3702.AT3G18550.1-P
PRIDE A1YKT1
EnsemblPlants AT3G18550.1
GeneID 821386
KEGG ath:AT3G18550
TAIR AT3G18550
eggNOG NOG324306
HOGENOM HOG000154529
InParanoid A1YKT1
OMA NTTETRG
Proteomes UP000006548
Genevestigator A1YKT1
GO GO:0005634
GO:0003677
GO:0003700
GO:0007275
GO:2000032
GO:0006355
GO:0006351
InterPro IPR017888
IPR017887
IPR005333
Pfam PF03634
PROSITE PS51370
PS51369

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0010223

secondary shoot formation

PMID:23524661[1]

ECO:0000315

P

Fig 1 & 3.

complete
CACAO 7971

involved_in

GO:0010223

secondary shoot formation

PMID:23524661[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:2000032

regulation of secondary shoot formation

PMID:17307924[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:17307924[2]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:11118137[3]

ECO:0000250

sequence similarity evidence used in manual assertion

F

Seeded From UniProt

Missing: with/from

involved_in

GO:2000032

regulation of secondary shoot formation

PMID:21873635[4]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002827609
TAIR:locus:2012403
TAIR:locus:2086929

P

Seeded From UniProt

complete

involved_in

GO:0048831

regulation of shoot system development

PMID:21873635[4]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002827609
TAIR:locus:2012403
TAIR:locus:2086929
UniProtKB:Q8LN68

P

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

PMID:21873635[4]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001578752
TAIR:locus:2092020
TAIR:locus:2196220

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[4]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001578752
TAIR:locus:2012403
TAIR:locus:2014661
TAIR:locus:2043659
TAIR:locus:2079202
TAIR:locus:2086929
TAIR:locus:2092020
TAIR:locus:2150803

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:21873635[4]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001578752
TAIR:locus:2092020
TAIR:locus:2150803

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

PMID:11118137[3]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

involved_in

GO:0007275

multicellular organism development

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0217

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 González-Grandío, E et al. (2013) BRANCHED1 promotes axillary bud dormancy in response to shade in Arabidopsis. Plant Cell 25 834-50 PubMed GONUTS page
  2. 2.0 2.1 Aguilar-Martínez, JA et al. (2007) Arabidopsis BRANCHED1 acts as an integrator of branching signals within axillary buds. Plant Cell 19 458-72 PubMed GONUTS page
  3. 3.0 3.1 Riechmann, JL et al. (2000) Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science 290 2105-10 PubMed GONUTS page
  4. 4.0 4.1 4.2 4.3 4.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page