ARATH:SERK1

Species (Taxon ID)	Arabidopsis thaliana (Mouse-ear cress). (3702)
Gene Name(s)	SERK1
Protein Name(s)	Somatic embryogenesis receptor kinase 1 AtSERK1 Somatic embryogenesis receptor-like kinase 1
External Links
UniProt	Q94AG2
EMBL	A67827 A67815 FJ708676 AC012654 CP002684 AY048200 BT002217
PIR	H96740
RefSeq	NP_177328.1
UniGene	At.12027 At.72107
PDB	4LSC 4LSX
PDBsum	4LSC 4LSX
ProteinModelPortal	Q94AG2
SMR	Q94AG2
BioGrid	28733
IntAct	Q94AG2
STRING	3702.AT1G71830.1-P
PaxDb	Q94AG2
PRIDE	Q94AG2
EnsemblPlants	AT1G71830.1
GeneID	843513
KEGG	ath:AT1G71830
GeneFarm	518
TAIR	AT1G71830
eggNOG	COG0515
HOGENOM	HOG000116554
InParanoid	Q94AG2
KO	K13418
OMA	WILDSTY
PhylomeDB	Q94AG2
BioCyc	ARA:AT1G71830-MONOMER
Proteomes	UP000006548
Genevestigator	Q94AG2
GO	GO:0005789 GO:0016021 GO:0005886 GO:0043234 GO:0005524 GO:0042802 GO:0033612 GO:0004675 GO:0004714 GO:0009742 GO:0009793 GO:0010227 GO:0007030 GO:0009556 GO:0010152 GO:0046777 GO:0006468 GO:0007178
Gene3D	2.60.120.200
InterPro	IPR013320 IPR011009 IPR001611 IPR025875 IPR013210 IPR000719 IPR017441 IPR008271
Pfam	PF00560 PF12799 PF08263 PF00069
SUPFAM	SSF56112
PROSITE	PS00107 PS50011 PS00108

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
enables	GO:0005102	signaling receptor binding	PMID:26320950^[1]	ECO:0000353	physical interaction evidence used in manual assertion	UniProtKB:Q9SSD1	F		Seeded From UniProt	complete
enables	GO:0033612	receptor serine/threonine kinase binding	PMID:26320950^[1]	ECO:0000353	physical interaction evidence used in manual assertion	UniProtKB:C0LGW6	F		Seeded From UniProt	complete
enables	GO:0033612	receptor serine/threonine kinase binding	PMID:26320950^[1]	ECO:0000353	physical interaction evidence used in manual assertion	UniProtKB:Q42371	F		Seeded From UniProt	complete
enables	GO:0033612	receptor serine/threonine kinase binding	PMID:19616764^[2]	ECO:0000353	physical interaction evidence used in manual assertion	UniProtKB:Q9ASS4	F		Seeded From UniProt	complete
part_of	GO:0005886	plasma membrane	PMID:19616764^[2]	ECO:0000314	direct assay evidence used in manual assertion		C		Seeded From UniProt	complete
involved_in	GO:0010227	floral organ abscission	PMID:20230490^[3]	ECO:0000316	genetic interaction evidence used in manual assertion	AGI_LocusCode:AT5G54310	P		Seeded From UniProt	complete
involved_in	GO:0010152	pollen maturation	PMID:16284306^[4]	ECO:0000315	mutant phenotype evidence used in manual assertion		P		Seeded From UniProt	complete
involved_in	GO:0009793	embryo development ending in seed dormancy	PMID:11706164^[5]	ECO:0000315	mutant phenotype evidence used in manual assertion		P		Seeded From UniProt	complete
involved_in	GO:0009742	brassinosteroid mediated signaling pathway	PMID:22253607^[6]	ECO:0000316	genetic interaction evidence used in manual assertion	AGI_LocusCode:AT2G13790 AGI_LocusCode:AT4G33430	P		Seeded From UniProt	complete
involved_in	GO:0009742	brassinosteroid mediated signaling pathway	PMID:18667726^[7]	ECO:0000315	mutant phenotype evidence used in manual assertion		P		Seeded From UniProt	complete
involved_in	GO:0009556	microsporogenesis	PMID:18667726^[7]	ECO:0000316	genetic interaction evidence used in manual assertion	AGI_LocusCode:At1g34210	P		Seeded From UniProt	complete
involved_in	GO:0009556	microsporogenesis	PMID:16284305^[8]	ECO:0000315	mutant phenotype evidence used in manual assertion		P		Seeded From UniProt	complete
involved_in	GO:0007030	Golgi organization	PMID:20230490^[3]	ECO:0000316	genetic interaction evidence used in manual assertion	AGI_LocusCode:AT5G54310	P		Seeded From UniProt	complete
involved_in	GO:0006468	protein phosphorylation	PMID:15592873^[9]	ECO:0000314	direct assay evidence used in manual assertion		P		Seeded From UniProt	complete
part_of	GO:0005886	plasma membrane	PMID:17644812^[10]	ECO:0000314	direct assay evidence used in manual assertion		C		Seeded From UniProt	complete
part_of	GO:0005886	plasma membrane	PMID:17317660^[11]	ECO:0000314	direct assay evidence used in manual assertion		C		Seeded From UniProt	complete
part_of	GO:0005886	plasma membrane	PMID:11397085^[12]	ECO:0000314	direct assay evidence used in manual assertion		C		Seeded From UniProt	complete
enables	GO:0004675	transmembrane receptor protein serine/threonine kinase activity	PMID:11509554^[13]	ECO:0000314	direct assay evidence used in manual assertion		F		Seeded From UniProt	complete
involved_in	GO:0006468	protein phosphorylation	PMID:21873635^[14]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN002405275 TAIR:locus:2013021 TAIR:locus:2151191	P		Seeded From UniProt	complete
part_of	GO:0005886	plasma membrane	PMID:21873635^[14]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN002405275 TAIR:locus:2009115 TAIR:locus:2013021 TAIR:locus:2013825 TAIR:locus:2018209 TAIR:locus:2023767 TAIR:locus:2025742 TAIR:locus:2026097 TAIR:locus:2028756 TAIR:locus:2035099 TAIR:locus:2035686 TAIR:locus:2036636 TAIR:locus:2038992 TAIR:locus:2040461 TAIR:locus:2046268 TAIR:locus:2051404 TAIR:locus:2054502 TAIR:locus:2059703 TAIR:locus:2062824 TAIR:locus:2064557 TAIR:locus:2066390 TAIR:locus:2075517 TAIR:locus:2077730 TAIR:locus:2081277 TAIR:locus:2088990 TAIR:locus:2090634 TAIR:locus:2090797 TAIR:locus:2091722 TAIR:locus:2091980 TAIR:locus:2093591 TAIR:locus:2093900 TAIR:locus:2095188 TAIR:locus:2099009 TAIR:locus:2125566 TAIR:locus:2132168 TAIR:locus:2132353 TAIR:locus:2145407 TAIR:locus:2146102 TAIR:locus:2146203 TAIR:locus:2151191 TAIR:locus:2159873 TAIR:locus:2171342 TAIR:locus:2179857 TAIR:locus:2183018 TAIR:locus:2202084 TAIR:locus:504954886 UniProtKB:F4IQ85 UniProtKB:F4JI10 UniProtKB:Q3EDL4 UniProtKB:Q67YR4 UniProtKB:Q6R2J8 UniProtKB:Q6Z4U4 UniProtKB:Q94F62 UniProtKB:Q9C8M9 UniProtKB:Q9FX99 UniProtKB:Q9LQQ8 UniProtKB:Q9LUL4	C		Seeded From UniProt	complete
enables	GO:0004675	transmembrane receptor protein serine/threonine kinase activity	PMID:21873635^[14]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN002405275 TAIR:locus:2013021 TAIR:locus:2013825	F		Seeded From UniProt	complete
enables	GO:0042802	identical protein binding	PMID:29320478^[15]	ECO:0000353	physical interaction evidence used in manual assertion	UniProtKB:Q94AG2	F	occurs_in:(GO:0005886)	Seeded From UniProt	complete
enables	GO:0042802	identical protein binding	PMID:16621602^[16]	ECO:0000353	physical interaction evidence used in manual assertion	UniProtKB:Q94AG2	F	occurs_in:(GO:0005886)	Seeded From UniProt	complete
enables	GO:0042802	identical protein binding	PMID:11397085^[12]	ECO:0000353	physical interaction evidence used in manual assertion	UniProtKB:Q94AG2	F	occurs_in:(GO:0005886)	Seeded From UniProt	complete
involved_in	GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway	GO_REF:0000108	ECO:0000364	evidence based on logical inference from manual annotation used in automatic assertion	GO:0004675	P		Seeded From UniProt	complete
involved_in	GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway	GO_REF:0000108	ECO:0000364	evidence based on logical inference from manual annotation used in automatic assertion	GO:0004675	P		Seeded From UniProt	complete
involved_in	GO:0018108	peptidyl-tyrosine phosphorylation	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0004713	P		Seeded From UniProt	complete
involved_in	GO:0018108	peptidyl-tyrosine phosphorylation	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0004714	P		Seeded From UniProt	complete
enables	GO:0004672	protein kinase activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR031048	F		Seeded From UniProt	complete
enables	GO:0005102	signaling receptor binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR031048	F		Seeded From UniProt	complete
enables	GO:0005524	ATP binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000719 InterPro:IPR017441	F		Seeded From UniProt	complete
involved_in	GO:0006468	protein phosphorylation	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000719 InterPro:IPR008271	P		Seeded From UniProt	complete
involved_in	GO:0007165	signal transduction	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR031048	P		Seeded From UniProt	complete
enables	GO:0004714	transmembrane receptor protein tyrosine kinase activity	GO_REF:0000003	ECO:0000501	evidence used in automatic assertion	EC:2.7.10.1	F		Seeded From UniProt	complete
involved_in	GO:0046777	protein autophosphorylation	PMID:15592873^[9]	ECO:0000304	author statement supported by traceable reference used in manual assertion		P		Seeded From UniProt	complete
enables	GO:0016740	transferase activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0808	F		Seeded From UniProt	complete
part_of	GO:0005886	plasma membrane	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-1003 UniProtKB-SubCell:SL-0039	C		Seeded From UniProt	complete
part_of	GO:0016020	membrane	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0472	C		Seeded From UniProt	complete
enables	GO:0004674	protein serine/threonine kinase activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0723	F		Seeded From UniProt	complete
part_of	GO:0005783	endoplasmic reticulum	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0256	C		Seeded From UniProt	complete
enables	GO:0016301	kinase activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0418	F		Seeded From UniProt	complete
part_of	GO:0016021	integral component of membrane	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0812	C		Seeded From UniProt	complete
enables	GO:0005524	ATP binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0067	F		Seeded From UniProt	complete
enables	GO:0000166	nucleotide binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0547	F		Seeded From UniProt	complete
enables	GO:0004713	protein tyrosine kinase activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0829	F		Seeded From UniProt	complete
involved_in	GO:0016310	phosphorylation	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0418	P		Seeded From UniProt	complete
part_of	GO:0005789	endoplasmic reticulum membrane	GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-SubCell:SL-0097	C		Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.0 ^1.1 ^1.2 Meng, X et al. (2015) Differential Function of Arabidopsis SERK Family Receptor-like Kinases in Stomatal Patterning. Curr. Biol. 25 2361-72 PubMed GONUTS page
↑ ^2.0 ^2.1 Gao, M et al. (2009) Regulation of cell death and innate immunity by two receptor-like kinases in Arabidopsis. Cell Host Microbe 6 34-44 PubMed GONUTS page
↑ ^3.0 ^3.1 Lewis, MW et al. (2010) The SERK1 receptor-like kinase regulates organ separation in Arabidopsis flowers. Plant J. 62 817-28 PubMed GONUTS page
↑ Colcombet, J et al. (2005) Arabidopsis SOMATIC EMBRYOGENESIS RECEPTOR KINASES1 and 2 are essential for tapetum development and microspore maturation. Plant Cell 17 3350-61 PubMed GONUTS page
↑ Hecht, V et al. (2001) The Arabidopsis SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 gene is expressed in developing ovules and embryos and enhances embryogenic competence in culture. Plant Physiol. 127 803-16 PubMed GONUTS page
↑ Gou, X et al. (2012) Genetic evidence for an indispensable role of somatic embryogenesis receptor kinases in brassinosteroid signaling. PLoS Genet. 8 e1002452 PubMed GONUTS page
↑ ^7.0 ^7.1 Albrecht, C et al. (2008) Arabidopsis SOMATIC EMBRYOGENESIS RECEPTOR KINASE proteins serve brassinosteroid-dependent and -independent signaling pathways. Plant Physiol. 148 611-9 PubMed GONUTS page
↑ Albrecht, C et al. (2005) The Arabidopsis thaliana SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASES1 and 2 control male sporogenesis. Plant Cell 17 3337-49 PubMed GONUTS page
↑ ^9.0 ^9.1 Rienties, IM et al. (2005) The Arabidopsis SERK1 protein interacts with the AAA-ATPase AtCDC48, the 14-3-3 protein GF14lambda and the PP2C phosphatase KAPP. Planta 221 394-405 PubMed GONUTS page
↑ Marmagne, A et al. (2007) A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. Mol. Cell Proteomics 6 1980-96 PubMed GONUTS page
↑ Benschop, JJ et al. (2007) Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. Mol. Cell Proteomics 6 1198-214 PubMed GONUTS page
↑ ^12.0 ^12.1 Shah, K et al. (2001) Subcellular localization and oligomerization of the Arabidopsis thaliana somatic embryogenesis receptor kinase 1 protein. J. Mol. Biol. 309 641-55 PubMed GONUTS page
↑ Shah, K et al. (2001) Role of threonines in the Arabidopsis thaliana somatic embryogenesis receptor kinase 1 activation loop in phosphorylation. J. Biol. Chem. 276 41263-9 PubMed GONUTS page
↑ ^14.0 ^14.1 ^14.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
↑ Smakowska-Luzan, E et al. (2018) An extracellular network of Arabidopsis leucine-rich repeat receptor kinases. Nature 553 342-346 PubMed GONUTS page
↑ Aker, J et al. (2006) The Arabidopsis thaliana AAA protein CDC48A interacts in vivo with the somatic embryogenesis receptor-like kinase 1 receptor at the plasma membrane. J. Struct. Biol. 156 62-71 PubMed GONUTS page

[PMID:26320950-1] 1.0 ^1.1 ^1.2 Meng, X et al. (2015) Differential Function of Arabidopsis SERK Family Receptor-like Kinases in Stomatal Patterning. Curr. Biol. 25 2361-72 PubMed GONUTS page

[PMID:19616764-2] 2.0 ^2.1 Gao, M et al. (2009) Regulation of cell death and innate immunity by two receptor-like kinases in Arabidopsis. Cell Host Microbe 6 34-44 PubMed GONUTS page

[PMID:20230490-3] 3.0 ^3.1 Lewis, MW et al. (2010) The SERK1 receptor-like kinase regulates organ separation in Arabidopsis flowers. Plant J. 62 817-28 PubMed GONUTS page

[PMID:16284306-4] Colcombet, J et al. (2005) Arabidopsis SOMATIC EMBRYOGENESIS RECEPTOR KINASES1 and 2 are essential for tapetum development and microspore maturation. Plant Cell 17 3350-61 PubMed GONUTS page

[PMID:11706164-5] Hecht, V et al. (2001) The Arabidopsis SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 gene is expressed in developing ovules and embryos and enhances embryogenic competence in culture. Plant Physiol. 127 803-16 PubMed GONUTS page

[PMID:22253607-6] Gou, X et al. (2012) Genetic evidence for an indispensable role of somatic embryogenesis receptor kinases in brassinosteroid signaling. PLoS Genet. 8 e1002452 PubMed GONUTS page

[PMID:18667726-7] 7.0 ^7.1 Albrecht, C et al. (2008) Arabidopsis SOMATIC EMBRYOGENESIS RECEPTOR KINASE proteins serve brassinosteroid-dependent and -independent signaling pathways. Plant Physiol. 148 611-9 PubMed GONUTS page

[PMID:16284305-8] Albrecht, C et al. (2005) The Arabidopsis thaliana SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASES1 and 2 control male sporogenesis. Plant Cell 17 3337-49 PubMed GONUTS page

[PMID:15592873-9] 9.0 ^9.1 Rienties, IM et al. (2005) The Arabidopsis SERK1 protein interacts with the AAA-ATPase AtCDC48, the 14-3-3 protein GF14lambda and the PP2C phosphatase KAPP. Planta 221 394-405 PubMed GONUTS page

[PMID:17644812-10] Marmagne, A et al. (2007) A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. Mol. Cell Proteomics 6 1980-96 PubMed GONUTS page

[PMID:17317660-11] Benschop, JJ et al. (2007) Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. Mol. Cell Proteomics 6 1198-214 PubMed GONUTS page

[PMID:11397085-12] 12.0 ^12.1 Shah, K et al. (2001) Subcellular localization and oligomerization of the Arabidopsis thaliana somatic embryogenesis receptor kinase 1 protein. J. Mol. Biol. 309 641-55 PubMed GONUTS page

[PMID:11509554-13] Shah, K et al. (2001) Role of threonines in the Arabidopsis thaliana somatic embryogenesis receptor kinase 1 activation loop in phosphorylation. J. Biol. Chem. 276 41263-9 PubMed GONUTS page

[PMID:21873635-14] 14.0 ^14.1 ^14.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

[PMID:29320478-15] Smakowska-Luzan, E et al. (2018) An extracellular network of Arabidopsis leucine-rich repeat receptor kinases. Nature 553 342-346 PubMed GONUTS page

[PMID:16621602-16] Aker, J et al. (2006) The Arabidopsis thaliana AAA protein CDC48A interacts in vivo with the somatic embryogenesis receptor-like kinase 1 receptor at the plasma membrane. J. Struct. Biol. 156 62-71 PubMed GONUTS page

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ARATH:SERK1

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