GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
AGRT5:A9CJB5
Contents
Species (Taxon ID) | Agrobacterium tumefaciens (strain C58 / ATCC 33970). (176299) | |
Gene Name(s) | No Information Provided. | |
Protein Name(s) | Lon protease (ECO:0000256 with HAMAP-Rule:MF_01973, ECO:0000256 with PIRNR:PIRNR001174)
ATP-dependent protease La (ECO:0000256 with HAMAP-Rule:MF_01973) | |
External Links | ||
UniProt | A9CJB5 | |
EMBL | AE007869 | |
PIR | AH2731 G97512 | |
RefSeq | NP_354271.1 | |
ProteinModelPortal | A9CJB5 | |
SMR | A9CJB5 | |
STRING | 176299.Atu1261 | |
MEROPS | S16.001 | |
EnsemblBacteria | AAK87056 | |
GeneID | 1133299 | |
KEGG | atu:Atu1261 | |
PATRIC | 20812289 | |
eggNOG | COG0466 | |
HOGENOM | HOG000261410 | |
KO | K01338 | |
OMA | IPVARMD | |
OrthoDB | EOG6XHC23 | |
BioCyc | AGRO:ATU1261-MONOMER | |
Proteomes | UP000000813 | |
GO | GO:0005737 GO:0005524 GO:0004176 GO:0043565 GO:0004252 GO:0033554 GO:0006515 | |
Gene3D | 3.30.230.10 3.40.50.300 | |
HAMAP | MF_01973 | |
InterPro | IPR003593 IPR003959 IPR027543 IPR004815 IPR027065 IPR027417 IPR008269 IPR003111 IPR008268 IPR015947 IPR020568 IPR014721 | |
PANTHER | PTHR10046 | |
Pfam | PF00004 PF02190 PF05362 | |
PIRSF | PIRSF001174 | |
SMART | SM00382 SM00464 | |
SUPFAM | SSF52540 SSF54211 SSF88697 | |
TIGRFAMs | TIGR00763 | |
PROSITE | PS01046 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0006508 |
proteolysis |
ECO:0000315 |
P |
They used the process of proteolysis to determine the different growth rates by creating a null mutant and inserting it into the lon gene by double-crossover homologous recombination. The results show that the wildtype lon gene grew at a faster rate than the different mutants and along with the different growth rates, the colony sizes of the wildtype and mutants differed which would correspond with the growth rate. In figure 2, the growth of A. tumefaciens wild-type and lon mutant strains on ABM minimal medium were shown and the rates can be compared. |
complete | |||||
enables |
GO:0004176 |
ATP-dependent peptidase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR004815 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0004252 |
serine-type endopeptidase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR008268 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR003959 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006508 |
proteolysis |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR004815 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030163 |
protein catabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0000166 |
nucleotide binding |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0008233 |
peptidase activity |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0008236 |
serine-type peptidase activity |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006508 |
proteolysis |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006515 |
protein quality control for misfolded or incompletely synthesized proteins |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000161584 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0004252 |
serine-type endopeptidase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000414636 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0034605 |
cellular response to heat |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000161584 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000161584 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0004176 |
ATP-dependent peptidase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000414636 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0016887 |
ATPase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000161584 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000161584 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000161584 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0004176 |
ATP-dependent peptidase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000161584 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0004252 |
serine-type endopeptidase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000161584 |
F |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Su, S et al. (2006) Lon protease of the alpha-proteobacterium Agrobacterium tumefaciens is required for normal growth, cellular morphology and full virulence. Microbiology (Reading, Engl.) 152 1197-207 PubMed GONUTS page
a
b
p